RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SLC39A8Q9C0K1 460 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 CAAP1Q9H8G2 361 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 SLC38A7Q9NVC3 462 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 TLL2Q9Y6L7 1015 aa19.18■□□□□ 0.66
SDCBP-204ENST00000447182 TRIM64CA6NLI5 447 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 SLC26A3P40879 764 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 CHRNA4P43681 627 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 CRYBB1P53674 252 aaPredicted RBP19.17■□□□□ 0.66
SDCBP-204ENST00000447182 PRKCQQ04759 706 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 MYBPC3Q14896 1274 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 ZNF789Q5FWF6 425 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 MFSD2AQ8NA29 543 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 DIS3LQ8TF46 1054 aaKnown RBP19.17■□□□□ 0.66
SDCBP-204ENST00000447182 PPP1R13LQ8WUF5 828 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 CDCA5Q96FF9 252 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 GPATCH1Q9BRR8 931 aaKnown RBP19.17■□□□□ 0.66
SDCBP-204ENST00000447182 TRIM62Q9BVG3 475 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 CATSPERBQ9H7T0 1116 aa19.17■□□□□ 0.66
SDCBP-204ENST00000447182 RBM22Q9NW64 420 aaKnown RBP eCLIP19.17■□□□□ 0.66
SDCBP-204ENST00000447182 TUBA8Q9NY65 449 aaPredicted RBP19.17■□□□□ 0.66
SDCBP-204ENST00000447182 UBFD1O14562 309 aaKnown RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 WISP3O95389 354 aaPredicted RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 GJA5P36382 358 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 SLC7A2P52569 658 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 SEPT6Q14141 434 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 BRMS1LQ5PSV4 323 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 ARTNQ5T4W7 220 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 RPS27LQ71UM5 84 aaKnown RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 RNF135Q8IUD6 432 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 FUNDC1Q8IVP5 155 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 FIBCD1Q8N539 461 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 GOLM1Q8NBJ4 401 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 PCYOX1LQ8NBM8 494 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 TMIGD2Q96BF3 282 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 PHF21BQ96EK2 531 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 TCF12Q99081 682 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 SIK2Q9H0K1 926 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 CCM2LQ9NUG4 571 aaPredicted RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 TIMM13Q9Y5L4 95 aaPredicted RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 A0A0J9YVX5 310 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 DDNO94850 711 aaPredicted RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 GPX3P22352 226 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 YWHAQP27348 245 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 NDST2P52849 883 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 PLK1P53350 603 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 NFKB2Q00653 900 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 KCTD21Q4G0X4 260 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 INTS11Q5TA45 600 aaKnown RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 AFMIDQ63HM1 303 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 TWF2Q6IBS0 349 aaKnown RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 DHRS4L2Q6PKH6 230 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 LPCAT2Q7L5N7 544 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 DPP9Q86TI2 863 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 LRRC49Q8IUZ0 686 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 OR9I1Q8NGQ6 314 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 CANT1Q8WVQ1 401 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 PPWD1Q96BP3 646 aaKnown RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 TINF2Q9BSI4 451 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 ABCD2Q9UBJ2 740 aa19.16■□□□□ 0.66
SDCBP-204ENST00000447182 PTBP2Q9UKA9 531 aaKnown RBP19.16■□□□□ 0.66
SDCBP-204ENST00000447182 AQP12BA6NM10 295 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 ZNF839A8K0R7 811 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 SOCS2O14508 198 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 IRAK2O43187 625 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 TIPRLO75663 272 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 PAPSS2O95340 614 aaPredicted RBP19.15■□□□□ 0.66
SDCBP-204ENST00000447182 CKMT2P17540 419 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 PCSK1P29120 753 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 STX1BP61266 288 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 ZNF678Q5SXM1 525 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 HECTD2Q5U5R9 776 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 KDELC1Q6UW63 502 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 AQP12AQ8IXF9 295 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 GRIN3AQ8TCU5 1115 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 HOPXQ9BPY8 73 aaPredicted RBP19.15■□□□□ 0.66
SDCBP-204ENST00000447182 ATP13A1Q9HD20 1204 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 CACNG4Q9UBN1 327 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 NYNRINQ9P2P1 1898 aaKnown RBP19.15■□□□□ 0.66
SDCBP-204ENST00000447182 TRIP12Q14669 1992 aaPredicted RBP19.15■□□□□ 0.66
SDCBP-204ENST00000447182 PLOD2O00469 737 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 ATP6V1B2P21281 511 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 GRIA3P42263 894 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 WNT3AP56704 352 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 MFSD10Q14728 455 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 MAP7D1Q3KQU3 841 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 UGT3A2Q3SY77 523 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 PRMT9Q6P2P2 845 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 LAYNQ6UX15 382 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 ADAMTS16Q8TE57 1224 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 ANKRD49Q8WVL7 239 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 MYLPFQ96A32 169 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 C19orf60Q96EN9 201 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 ATXN3LQ9H3M9 355 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 VPS45Q9NRW7 570 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 IRAK4Q9NWZ3 460 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 VWA7Q9Y334 891 aa19.15■□□□□ 0.66
SDCBP-204ENST00000447182 TREHO43280 583 aa19.14■□□□□ 0.65
SDCBP-204ENST00000447182 ALDOCP09972 364 aaKnown RBP19.14■□□□□ 0.65
SDCBP-204ENST00000447182 ADARP55265 1226 aaKnown RBP19.14■□□□□ 0.65
SDCBP-204ENST00000447182 ATP6V0D1P61421 351 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms