RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 PITRM1Q5JRX3 1037 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 C10orf120Q5SQS8 335 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 ZFYVE27Q5T4F4 411 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 OR6B2Q6IFH4 312 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 ACAD11Q709F0 780 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 RCBTB1Q8NDN9 531 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 VPS50Q96JG6 964 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 DNAI2Q9GZS0 605 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 SIRPGQ9P1W8 387 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 TTC7AQ9ULT0 858 aaPredicted RBP6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 PADI2Q9Y2J8 665 aa6.4□□□□□ -1.39
BRAFP1-201ENST00000445336 TGP01266 2768 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 HERC2O95714 4834 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 PLS3P13797 630 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 CD58P19256 250 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 HNRNPH3P31942 346 aaKnown RBP6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 KCNC1P48547 511 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 MFAP5Q13361 173 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 PRKD1Q15139 912 aaPredicted RBP6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 TSGA10IPQ3SY00 556 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 MDH1BQ5I0G3 518 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 MAEAQ7L5Y9 396 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 CXorf38Q8TB03 319 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 TNIP3Q96KP6 325 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 OLFM1Q99784 485 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 UBXN6Q9BZV1 441 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 YAE1D1Q9NRH1 226 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 HS3ST4Q9Y661 456 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 VWA3AA6NCI4 1184 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 TTC34A8MYJ7 566 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 GGT5P36269 586 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 KIR2DL3P43628 341 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 CXCR3P49682 368 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 ALG11Q2TAA5 492 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 SFR1Q86XK3 245 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 MEIOBQ8N635 442 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 SMPDL3BQ92485 455 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 GPR137Q96N19 417 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 TRIB1Q96RU8 372 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 MSTO1Q9BUK6 570 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 B3GNT5Q9BYG0 378 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 TCEAL2Q9H3H9 227 aaPredicted RBP6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 WASH6PQ9NQA3 447 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 DMRT3Q9NQL9 472 aa6.39□□□□□ -1.39
BRAFP1-201ENST00000445336 KIAA0754O94854 1291 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 POLR2BP30876 1174 aaKnown RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 SRP54P61011 504 aaKnown RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 C1orf61Q13536 156 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 CWC27Q6UX04 472 aaKnown RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 BCL11AQ9H165 835 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 ATP13A2Q9NQ11 1180 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 AGAP1Q9UPQ3 857 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 R3HCC1Q9Y3T6 440 aaKnown RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 FADS3Q9Y5Q0 445 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 SNX9Q9Y5X1 595 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 DYNC2H1Q8NCM8 4307 aaKnown RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 KIAA0391O15091 583 aaKnown RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 DNAJB6O75190 326 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 LDHAP00338 332 aaKnown RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 FDXRP22570 491 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 CD70P32970 193 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 GNL1P36915 607 aaPredicted RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 SSPNQ14714 243 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 TTC39BQ5VTQ0 682 aaPredicted RBP6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 C20orf204Q6ZNR8 217 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 MFN1Q8IWA4 741 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 UNC45BQ8IWX7 931 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 ZNF518BQ9C0D4 1074 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 HAPLN2Q9GZV7 340 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 BTRCQ9Y297 605 aa6.38□□□□□ -1.39
BRAFP1-201ENST00000445336 ADAM10O14672 748 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 TCF21O43680 179 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 PCDH8O95206 1070 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 IFNAR1P17181 557 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 MTA1Q13330 715 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 FBXL19-AS1Q494R0 122 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 TDRD12Q587J7 1177 aaKnown RBP6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 OTOAQ7RTW8 1153 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 DENND1CQ8IV53 801 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 PLPP6Q8IY26 295 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 FBXL16Q8N461 479 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 ASB11Q8WXH4 323 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 NTNG2Q96CW9 530 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 WDR92Q96MX6 357 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 RSPO3Q9BXY4 272 aaPredicted RBP6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 BEX2Q9BXY8 128 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 GSDMCQ9BYG8 508 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 KLQ9UEF7 1012 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 TCFL5Q9UL49 500 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 SNX7Q9UNH6 387 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 FAM47E-STBD1D6RA91 191 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 PEX12O00623 359 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 SLC26A4O43511 780 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 ZNF18P17022 549 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 ZNF28P17035 718 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 RXRAP19793 462 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 PDIA3P30101 505 aaKnown RBP6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 SLC12A3P55017 1021 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 CALCRLQ16602 461 aa6.37□□□□□ -1.39
BRAFP1-201ENST00000445336 TPRG1LQ5T0D9 272 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms