RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 PABPC3Q9H361 631 aaKnown RBP15.18■□□□□ 0.02
CCNE1-203ENST00000444983 MFSD1Q9H3U5 465 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 POLMQ9NP87 494 aaPredicted RBP15.18■□□□□ 0.02
CCNE1-203ENST00000444983 BFARQ9NZS9 450 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 MTRF1LQ9UGC7 380 aaKnown RBP15.18■□□□□ 0.02
CCNE1-203ENST00000444983 SERGEFQ9UGK8 458 aa15.18■□□□□ 0.02
CCNE1-203ENST00000444983 NPIPB15A6NHN6 443 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-203ENST00000444983 UPK3BL1B0FP48 263 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 UPK3BL2E5RIL1 263 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 LDB2O43679 373 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 BANF1O75531 89 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 PAPSS2O95340 614 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-203ENST00000444983 PRKCGP05129 697 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 ALPIP09923 528 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 ADRB3P13945 408 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 CTPS1P17812 591 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 MGAT1P26572 445 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 P2RY2P41231 377 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 ABL2P42684 1182 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 TNNT3P45378 269 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-203ENST00000444983 SESN2P58004 480 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-203ENST00000444983 AGBL4Q5VU57 503 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 CENPUQ71F23 418 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 TTC7BQ86TV6 843 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 RASSF3Q86WH2 238 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 IGDCC3Q8IVU1 814 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 CBARPQ8N350 705 aaPredicted RBP15.17■□□□□ 0.02
CCNE1-203ENST00000444983 AENQ8WTP8 325 aaKnown RBP15.17■□□□□ 0.02
CCNE1-203ENST00000444983 EID2BQ96D98 161 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 SIPA1Q96FS4 1042 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 SYBUQ9NX95 663 aa15.17■□□□□ 0.02
CCNE1-203ENST00000444983 MROH6A6NGR9 719 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 PLK4O00444 970 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 AURKAO14965 403 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 DNTTP04053 509 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 PIRTP0C851 137 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 LHCGRP22888 699 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 PSMA3P25788 255 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 NEK3P51956 506 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 EPHB1P54762 984 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 TAS2R38P59533 333 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 CRADDP78560 199 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 PDIA2Q13087 525 aaKnown RBP15.16■□□□□ 0.02
CCNE1-203ENST00000444983 FASTKD3Q14CZ7 662 aaKnown RBP15.16■□□□□ 0.02
CCNE1-203ENST00000444983 CFAP58Q5T655 872 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 USP30Q70CQ3 517 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 NDUFAF2Q8N183 169 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 RAB7BQ96AH8 199 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 SRPK1Q96SB4 655 aaKnown RBP15.16■□□□□ 0.02
CCNE1-203ENST00000444983 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
CCNE1-203ENST00000444983 KIFC1Q9BW19 673 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 TRABDQ9H4I3 376 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 PLAC1Q9HBJ0 212 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 PCDH12Q9NPG4 1184 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 ITM2CQ9NQX7 267 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 HACD3Q9P035 362 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 EBF1Q9UH73 591 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 ZDBF2Q9HCK1 2354 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 MAGEB16A2A368 324 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 IGLV3-19P01714 112 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 ADRA1DP25100 572 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 HMGCLP35914 325 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 MMP12P39900 470 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 ELK3P41970 407 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 RALGDSQ12967 914 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 POU6F1Q14863 301 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 BBS9Q3SYG4 887 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 DNAJC21Q5F1R6 531 aaKnown RBP15.16■□□□□ 0.02
CCNE1-203ENST00000444983 LRRC73Q5JTD7 316 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 PCID2Q5JVF3 399 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 FBXL19Q6PCT2 694 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 CRTC1Q6UUV9 634 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 USP45Q70EL2 814 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 DPPA4Q7L190 304 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 TMC3Q7Z5M5 1100 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 BMP8AQ7Z5Y6 402 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 TMEM135Q86UB9 458 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 CACUL1Q86Y37 369 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 TTC30BQ8N4P2 665 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 CAMKK1Q8N5S9 505 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 PTCD2Q8WV60 388 aaKnown RBP15.16■□□□□ 0.02
CCNE1-203ENST00000444983 CHRAC1Q9NRG0 131 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 FBXL12Q9NXK8 326 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 USP36Q9P275 1121 aaKnown RBP15.16■□□□□ 0.02
CCNE1-203ENST00000444983 B4GALT6Q9UBX8 382 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 FZD4Q9ULV1 537 aa15.16■□□□□ 0.02
CCNE1-203ENST00000444983 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 CACNA1IQ9P0X4 2223 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 BPTFQ12830 3046 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 A0A0U1RQS6 177 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 A0A1W2PP55 124 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 C10orf142B7Z368 130 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 K7ESF4 209 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 AP1G1O43747 822 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 TPMTP51580 245 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 PTSQ03393 145 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 TAF1AQ15573 450 aaPredicted RBP15.15■□□□□ 0.02
CCNE1-203ENST00000444983 CCDC38Q502W7 563 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 CEP128Q6ZU80 1094 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 TSPAN33Q86UF1 283 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms