RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 SPECC1L-ADORA2AF8WAN1 911 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 H0Y626 953 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 SCAMP3O14828 347 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 CD3EAPO15446 510 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 TEX28O15482 410 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 TBL1XO60907 577 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 EFCAB14O75071 495 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 RPP40O75818 363 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 CRTAMO95727 393 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 GOT2P00505 430 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 TIMP1P01033 207 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 CHRNGP07510 517 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 CR2P20023 1033 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 CES1P23141 567 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 CCND1P24385 295 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 ITGB8P26012 769 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 PABPC1LQ4VXU2 614 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 MRNIPQ6NTE8 343 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 TMC7Q7Z402 723 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 RNF135Q8IUD6 432 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 CARNMT1Q8N4J0 409 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 SLC22A12Q96S37 553 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 ZNF334Q9HCZ1 680 aaPredicted RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 ACSS2Q9NR19 701 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.73□□□□□ -0.21
RBM39-216ENST00000444878 STOML2Q9UJZ1 356 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 CRYL1Q9Y2S2 319 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 RAP2CQ9Y3L5 183 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 GBF1Q92538 1859 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 PDE4DIPQ5VU43 2346 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 PTPRSQ13332 1948 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 DOCK6Q96HP0 2047 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 TYW5A2RUC4 315 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 WFS1O76024 890 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 PIGNO95427 931 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 LATS1O95835 1130 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 F11P03951 625 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 LTA4HP09960 611 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 SPATA31D3P0C874 917 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 HDCP19113 662 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 AOC1P19801 751 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 PPM1AP35813 382 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 CYTH1Q15438 398 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 LRRC26Q2I0M4 334 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 ARL13AQ5H913 290 aaPredicted RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 KLC3Q6P597 504 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 ZNF783Q6ZMS7 281 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 SPATA31D4Q6ZUB0 917 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 ARL14EPQ8N8R7 260 aaPredicted RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 TTC16Q8NEE8 873 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 SGF29Q96ES7 293 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 PAWRQ96IZ0 340 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 ZFRQ96KR1 1074 aaKnown RBP13.73□□□□□ -0.21
RBM39-216ENST00000444878 RIMKLBQ9ULI2 386 aa13.73□□□□□ -0.21
RBM39-216ENST00000444878 CCDC162PA2VCL2 907 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 CCDC166P0CW27 439 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 ACRP10323 421 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 RAG1P15918 1043 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 MPSTP25325 297 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 RPL14P50914 215 aaKnown RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 ARF5P84085 180 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 PRKAA1Q13131 559 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 E2F5Q15329 346 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 TXNDC8Q6A555 127 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 FAM45BPQ6NSW5 357 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 EPGNQ6UW88 154 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 TMPRSS6Q8IU80 811 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 CCNYL1Q8N7R7 359 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 OR4L1Q8NH43 312 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 FAM45AQ8TCE6 357 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 ZNF333Q96JL9 665 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 NSMCE3Q96MG7 304 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 TDRD1Q9BXT4 1180 aaKnown RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 CATSPERZQ9NTU4 200 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 MAFFQ9ULX9 164 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 ANKRD12Q6UB98 2062 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 SNAP91O60641 907 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 ATP5F1P24539 256 aaPredicted RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 PMLP29590 882 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 CCR10P46092 362 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 NSUN2Q08J23 767 aaKnown RBP eCLIP13.72□□□□□ -0.21
RBM39-216ENST00000444878 ILF2Q12905 390 aaKnown RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 FSCBQ5H9T9 825 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 TECRLQ5HYJ1 363 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 WASHC2DQ5SRD0 308 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 LINGO4Q6UY18 593 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 GLT6D1Q7Z4J2 308 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 SDCCAG8Q86SQ7 713 aaPredicted RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 ARHGAP24Q8N264 748 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 HJURPQ8NCD3 748 aaPredicted RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 GPR150Q8NGU9 434 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 TMA16Q96EY4 203 aaKnown RBP13.72□□□□□ -0.21
RBM39-216ENST00000444878 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 SPOCK3Q9BQ16 436 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 C11orf49Q9H6J7 331 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 IL21Q9HBE4 155 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
RBM39-216ENST00000444878 NCKIPSDQ9NZQ3 722 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms