RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 CSF2P04141 144 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 NR2C2P49116 596 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 PEX5P50542 639 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 VAV2P52735 878 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 THOP1P52888 689 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 IFI35P80217 286 aaPredicted RBP18.71■□□□□ 0.59
CCDC188-202ENST00000444532 SEMG2Q02383 582 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 IRF4Q15306 451 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 SPOCD1Q6ZMY3 1216 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 BZW1Q7L1Q6 419 aaKnown RBP18.71■□□□□ 0.59
CCDC188-202ENST00000444532 TMEM139Q8IV31 216 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 NDUFAF2Q8N183 169 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 SLC25A45Q8N413 288 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 SPC24Q8NBT2 197 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 SCRN2Q96FV2 425 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 OLFM3Q96PB7 478 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 IL12RB2Q99665 862 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 TOR4AQ9NXH8 423 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 KCTD5Q9NXV2 234 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 PPIL1Q9Y3C6 166 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 RAI2Q9Y5P3 530 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 DUSP10Q9Y6W6 482 aa18.71■□□□□ 0.59
CCDC188-202ENST00000444532 H3BM21 787 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 ENC1O14682 589 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 PPP1R12AO14974 1030 aaPredicted RBP18.7■□□□□ 0.58
CCDC188-202ENST00000444532 SDC3O75056 442 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 RECQL5O94762 991 aaPredicted RBP18.7■□□□□ 0.58
CCDC188-202ENST00000444532 JCHAINP01591 159 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 CYP2A6P11509 494 aaPredicted RBP18.7■□□□□ 0.58
CCDC188-202ENST00000444532 KRT10P13645 584 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 NME1P15531 152 aaKnown RBP18.7■□□□□ 0.58
CCDC188-202ENST00000444532 CA4P22748 312 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 VIPR1P32241 457 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 NAP1L1P55209 391 aaKnown RBP18.7■□□□□ 0.58
CCDC188-202ENST00000444532 AP1B1Q10567 949 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 TFDP3Q5H9I0 405 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 TXLNBQ8N3L3 684 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 EXD1Q8NHP7 514 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 ARRDC2Q8TBH0 407 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 LRRN4Q8WUT4 740 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 PIH1D2Q8WWB5 315 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 RBM41Q96IZ5 413 aaKnown RBP18.7■□□□□ 0.58
CCDC188-202ENST00000444532 CNDP2Q96KP4 475 aaKnown RBP18.7■□□□□ 0.58
CCDC188-202ENST00000444532 SCNM1Q9BWG6 230 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 LACRTQ9GZZ8 138 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 B4GALT6Q9UBX8 382 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 TTLL3Q9Y4R7 772 aa18.7■□□□□ 0.58
CCDC188-202ENST00000444532 NEMP2A6NFY4 417 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 A8MX80 341 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 KCNK1O00180 336 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 HYAL3O43820 417 aaPredicted RBP18.69■□□□□ 0.58
CCDC188-202ENST00000444532 FZD6O60353 706 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 CST8O60676 142 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 TOP3BO95985 862 aaKnown RBP18.69■□□□□ 0.58
CCDC188-202ENST00000444532 HLA-DQB2P05538 268 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 DYNLT1P63172 113 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 DSC2Q02487 901 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 ZNF211Q13398 564 aaPredicted RBP18.69■□□□□ 0.58
CCDC188-202ENST00000444532 MTM1Q13496 603 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 INPP5AQ14642 412 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 HS1BP3Q53T59 392 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 ZNF542PQ5EBM4 170 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 TPRG1LQ5T0D9 272 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 NPNTQ6UXI9 565 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 MACC1Q6ZN28 852 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 USP45Q70EL2 814 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 KIAA1328Q86T90 577 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 CHCHD4Q8N4Q1 142 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 PNPLA1Q8N8W4 532 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 ACRBPQ8NEB7 543 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 KIAA1524Q8TCG1 905 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 BTN2A2Q8WVV5 523 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 MCCC1Q96RQ3 725 aaPredicted RBP18.69■□□□□ 0.58
CCDC188-202ENST00000444532 UCKL1Q9NWZ5 548 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 NEUROG3Q9Y4Z2 214 aa18.69■□□□□ 0.58
CCDC188-202ENST00000444532 FAM221BA6H8Z2 402 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 GOLGA8CPA6NN73 597 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 HEXIM1O94992 359 aaKnown RBP18.68■□□□□ 0.58
CCDC188-202ENST00000444532 PDHA1P08559 390 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 C1SP09871 688 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 CDK4P11802 303 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 JUNDP17535 347 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 TGM2P21980 687 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 COPS2P61201 443 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 RPL26P61254 145 aaKnown RBP18.68■□□□□ 0.58
CCDC188-202ENST00000444532 NIPAL4Q0D2K0 466 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 EIF2B5Q13144 721 aaKnown RBP18.68■□□□□ 0.58
CCDC188-202ENST00000444532 ACOX1Q15067 660 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 KDM7AQ6ZMT4 941 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 CCDC50Q8IVM0 306 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 CBARPQ8N350 705 aaPredicted RBP18.68■□□□□ 0.58
CCDC188-202ENST00000444532 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.68■□□□□ 0.58
CCDC188-202ENST00000444532 OR4C6Q8NH72 309 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 COQ10AQ96MF6 247 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 APOOQ9BUR5 198 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 KLF15Q9UIH9 416 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 RPL26L1Q9UNX3 145 aaKnown RBP18.68■□□□□ 0.58
CCDC188-202ENST00000444532 PCDHGA1Q9Y5H4 931 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 PCDHA3Q9Y5H8 950 aa18.68■□□□□ 0.58
CCDC188-202ENST00000444532 CSNK1G3Q9Y6M4 447 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms