RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 LENG8Q96PV6 779 aaPredicted RBP17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 TDRD1Q9BXT4 1180 aaKnown RBP17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 DNAAF2Q9NVR5 837 aaKnown RBP17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 B4GALT6Q9UBX8 382 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 HS3ST3A1Q9Y663 406 aa17.55■□□□□ 0.4
SMARCAL1-209ENST00000444508 TP53BP1Q12888 1972 aaPredicted RBP17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 CFAP69A5D8W1 941 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 A6NNZ2 444 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 ZSCAN12O43309 604 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 LZTS3O60299 673 aaPredicted RBP17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 DFNA5O60443 496 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 THEGLP0DJG4 465 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 C6P13671 934 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 NXPH1P58417 271 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 EIF3EP60228 445 aaKnown RBP17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 GCNT7Q6ZNI0 430 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 USP45Q70EL2 814 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 PTAR1Q7Z6K3 402 aaPredicted RBP17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 HTR3CQ8WXA8 447 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 TEKT5Q96M29 485 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 VAT1Q99536 393 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 SLC25A51Q9H1U9 297 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 GLOD4Q9HC38 313 aa17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 KLHL8Q9P2G9 620 aaPredicted RBP17.54■□□□□ 0.4
SMARCAL1-209ENST00000444508 A8MX80 341 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 H0Y8X5 98 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 RAD51BO15315 384 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 FZD6O60353 706 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 ZNF189O75820 626 aaPredicted RBP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 STK10O94804 968 aaKnown RBP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 RBP3P10745 1247 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 VIPR1P32241 457 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 CLDN2P57739 230 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 RPL26P61254 145 aaKnown RBP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 SKOR1P84550 965 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 WASHC5Q12768 1159 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 RALGDSQ12967 914 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 SLC14A1Q13336 389 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 DARS2Q6PI48 645 aaKnown RBP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 KYAT3Q6YP21 454 aaKnown RBP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 ABI3BPQ7Z7G0 1075 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 PIH1D2Q8WWB5 315 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 SCRN2Q96FV2 425 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 IMP4Q96G21 291 aaKnown RBP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 RBM15Q96T37 977 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 KLF6Q99612 283 aaPredicted RBP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 KCNF1Q9H3M0 494 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 IL21RQ9HBE5 538 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 PCDH9Q9HC56 1237 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 RPL26L1Q9UNX3 145 aaKnown RBP17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 CHKBQ9Y259 395 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 COQ6Q9Y2Z9 468 aa17.53■□□□□ 0.4
SMARCAL1-209ENST00000444508 TMEM131Q92545 1883 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 KCNK3O14649 394 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 MMP2P08253 660 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 PDHA1P08559 390 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 ZNF883P0CG24 379 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 CTPS1P17812 591 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 RBL1P28749 1068 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 ARRB1P49407 418 aaPredicted RBP17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 CCT8P50990 548 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 ARHGEF7Q14155 803 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 IHHQ14623 411 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 LRRC14Q15048 493 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 ZNF423Q2M1K9 1284 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 LIPIQ6XZB0 460 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 Q6ZSR6 202 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 DCP2Q8IU60 420 aaKnown RBP17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 OXR1Q8N573 874 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 LPCAT1Q8NF37 534 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 OR13H1Q8NG92 308 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 MCCC1Q96RQ3 725 aaPredicted RBP17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 ELF4Q99607 663 aaPredicted RBP17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 FAM118BQ9BPY3 351 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 ADGRE3Q9BY15 652 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 TM7SF3Q9NS93 570 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 TRHDEQ9UKU6 1024 aa17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 FNDC3AQ9Y2H6 1198 aaKnown RBP17.52■□□□□ 0.4
SMARCAL1-209ENST00000444508 LRRK1Q38SD2 2015 aa17.52■□□□□ 0.39
SMARCAL1-209ENST00000444508 ASCC3Q8N3C0 2202 aaKnown RBP17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 A0A0J9YYE9 177 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 POM121BA6NF01 834 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 YKT6O15498 198 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 TRBC1P01850 177 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 RABIFP47224 123 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 KLF1Q13351 362 aaPredicted RBP17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 SUZ12Q15022 739 aaKnown RBP17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 ACOX1Q15067 660 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 SLC14A2Q15849 920 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 FAM182AQ5T1J6 154 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 PID1Q7Z2X4 250 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 ZNF567Q8N184 647 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 TP53I13Q8NBR0 393 aaPredicted RBP17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 CENPTQ96BT3 561 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 IFT43Q96FT9 208 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 BMFQ96LC9 184 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 CARD9Q9H257 536 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 C10orf88Q9H8K7 445 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 ERVMER34-1Q9H9K5 563 aa17.51■□□□□ 0.39
SMARCAL1-209ENST00000444508 DNPEPQ9ULA0 475 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms