RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 LIG3P49916 1009 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 WNT3AP56704 352 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 POLR2LP62875 67 aaKnown RBP16.1■□□□□ 0.17
USP39-205ENST00000442708 RPS21P63220 83 aaKnown RBP16.1■□□□□ 0.17
USP39-205ENST00000442708 ELP6Q0PNE2 266 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 GALNT3Q14435 633 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 SF3A2Q15428 464 aaKnown RBP16.1■□□□□ 0.17
USP39-205ENST00000442708 SLC14A2Q15849 920 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 QPCTQ16769 361 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 HS1BP3Q53T59 392 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 KIAA1161Q6NSJ0 714 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 TTC27Q6P3X3 843 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 DRICH1Q6PGQ1 229 aaPredicted RBP16.1■□□□□ 0.17
USP39-205ENST00000442708 LAYNQ6UX15 382 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 LIPIQ6XZB0 460 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 KDM7AQ6ZMT4 941 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 NYAP1Q6ZVC0 841 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 TSPAN33Q86UF1 283 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 LPCAT1Q8NF37 534 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 ACTRT1Q8TDG2 376 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 MAIP1Q8WWC4 291 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 SCRN2Q96FV2 425 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 MRGPRX2Q96LB1 330 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 SLC6A18Q96N87 628 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 MYOCQ99972 504 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 SLC17A9Q9BYT1 436 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 TM9SF3Q9HD45 589 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 FAM153AQ9UHL3 310 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 ZNF148Q9UQR1 794 aa16.1■□□□□ 0.17
USP39-205ENST00000442708 A0A0J9YYE9 177 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 A0A1W2PQ67 120 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 CTAGE9A4FU28 777 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 CFAP69A5D8W1 941 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 OPHN1O60890 802 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 STK10O94804 968 aaKnown RBP16.09■□□□□ 0.17
USP39-205ENST00000442708 PAK4O96013 591 aaPredicted RBP16.09■□□□□ 0.17
USP39-205ENST00000442708 TRBC1P01850 177 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 WNT1P04628 370 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 ITGAVP06756 1048 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 ZSCAN5DPP0CG00 497 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 TCP1P17987 556 aaKnown RBP16.09■□□□□ 0.17
USP39-205ENST00000442708 HNF1BP35680 557 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 ETF1P62495 437 aaKnown RBP16.09■□□□□ 0.17
USP39-205ENST00000442708 BNC1Q01954 994 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 CDK18Q07002 472 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 OLIG2Q13516 323 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 FAXCQ5TGI0 409 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 ERAP2Q6P179 960 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 CRTC1Q6UUV9 634 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 SYT10Q6XYQ8 523 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 CREG2Q8IUH2 290 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 TAB3Q8N5C8 712 aaPredicted RBP16.09■□□□□ 0.17
USP39-205ENST00000442708 CXorf40AQ8TE69 158 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 SERAC1Q96JX3 654 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 KLF6Q99612 283 aaPredicted RBP16.09■□□□□ 0.17
USP39-205ENST00000442708 FERMT1Q9BQL6 677 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 SEMA4GQ9NTN9 838 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 DRG1Q9Y295 367 aaKnown RBP16.09■□□□□ 0.17
USP39-205ENST00000442708 TMEM131Q92545 1883 aa16.09■□□□□ 0.17
USP39-205ENST00000442708 LOC285095A0A1B0GVY8 99 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 A0A1W2PR77 199 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CAPN8A6NHC0 703 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 GOLGA8CPA6NN73 597 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 BCAT2O15382 392 aaPredicted RBP16.08■□□□□ 0.16
USP39-205ENST00000442708 ATXN1LP0C7T5 689 aaKnown RBP16.08■□□□□ 0.16
USP39-205ENST00000442708 ZNF806P0C7X5 589 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 C6P13671 934 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CA4P22748 312 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 STIP1P31948 543 aaKnown RBP16.08■□□□□ 0.16
USP39-205ENST00000442708 VIPR1P32241 457 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 HOXD12P35452 270 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CHRNA4P43681 627 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CSNK1EP49674 416 aaKnown RBP16.08■□□□□ 0.16
USP39-205ENST00000442708 EPHB1P54762 984 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CLDN2P57739 230 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 RPL26P61254 145 aaKnown RBP16.08■□□□□ 0.16
USP39-205ENST00000442708 IRX4P78413 519 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CNGA3Q16281 694 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CDKN3Q16667 212 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 DUOXA1Q1HG43 343 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 SETMARQ53H47 684 aaPredicted RBP16.08■□□□□ 0.16
USP39-205ENST00000442708 ITPRIPL1Q6GPH6 555 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 RFLNAQ6ZTI6 216 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 KLHDC8BQ8IXV7 354 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CBARPQ8N350 705 aaPredicted RBP16.08■□□□□ 0.16
USP39-205ENST00000442708 CAPZA3Q96KX2 299 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 HINFPQ9BQA5 517 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CAPN10Q9HC96 672 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 VPS45Q9NRW7 570 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 RXFP3Q9NSD7 469 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 RPL26L1Q9UNX3 145 aaKnown RBP16.08■□□□□ 0.16
USP39-205ENST00000442708 SAR1BQ9Y6B6 198 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 CACNA1EQ15878 2313 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 FAM186AA6NE01 2351 aa16.08■□□□□ 0.16
USP39-205ENST00000442708 MYLKQ15746 1914 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 GVINP1Q7Z2Y8 2422 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 A0A1B0GTW7 788 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 ANKRD66B4E2M5 251 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 H0Y8X5 98 aa16.07■□□□□ 0.16
USP39-205ENST00000442708 PDE2AO00408 941 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms