RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 SHOC2Q9UQ13 582 aa5.02□□□□□ -1.61
CCDC140-202ENST00000440903 ATP8A1Q9Y2Q0 1164 aa5.02□□□□□ -1.61
CCDC140-202ENST00000440903 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 LRRC72A6NJI9 287 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 UPK3BL1B0FP48 263 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 UPK3BL2E5RIL1 263 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 F5H423 210 aaPredicted RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 K7ERQ8 282 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PDE2AO00408 941 aaPredicted RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 DNALI1O14645 258 aaPredicted RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 FANCGO15287 622 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 SMAD6O43541 496 aaKnown RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 NDUFS2O75306 463 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 LEFTY1O75610 366 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PIGNO95427 931 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CRTAMO95727 393 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 AP2A1O95782 977 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 NDST3O95803 873 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PEX11BO96011 259 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 MT-CO1P00395 513 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TUBBP07437 444 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 HOXB4P17483 251 aaPredicted RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PAMP19021 973 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 SLC8A1P32418 973 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 RPL22P35268 128 aaKnown RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 NRLP54845 237 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 GDF10P55107 478 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 ARL4CP56559 192 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 WNT3AP56704 352 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PDE1BQ01064 536 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 SATB1Q01826 763 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CDK18Q07002 472 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CUL1Q13616 776 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 ENPP2Q13822 863 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 SEPT6Q14141 434 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 MORF4L2Q15014 288 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CYTH1Q15438 398 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TRIP13Q15645 432 aaPredicted RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 ZNF805Q5CZA5 627 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 ARTNQ5T4W7 220 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 FAXCQ5TGI0 409 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 EMC10Q5UCC4 262 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TMEM215Q68D42 235 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CWF19L1Q69YN2 538 aaKnown RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TTC27Q6P3X3 843 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CASC4Q6P4E1 433 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 NCEH1Q6PIU2 408 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 USP30Q70CQ3 517 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 ERN2Q76MJ5 926 aaKnown RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CYP2U1Q7Z449 544 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 BMP8AQ7Z5Y6 402 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TMPRSS6Q8IU80 811 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 MMAAQ8IVH4 418 aaKnown RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PDIK1LQ8N165 341 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 STK40Q8N2I9 435 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TAB3Q8N5C8 712 aaPredicted RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 OR2A12Q8NGT7 310 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 HCAR2Q8TDS4 363 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CXorf40AQ8TE69 158 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 FRS2Q8WU20 508 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 HMGB4Q8WW32 186 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PTPRN2Q92932 1015 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CLDN23Q96B33 292 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 KLHL32Q96NJ5 620 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 HHIPQ96QV1 700 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 RBM15Q96T37 977 aaKnown RBP eCLIP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 ACOX2Q99424 681 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PRRX2Q99811 253 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 ERP44Q9BS26 406 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TRIM51Q9BSJ1 452 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 FICDQ9BVA6 458 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 FOXP3Q9BZS1 431 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TRIM31Q9BZY9 425 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 DPH5Q9H2P9 285 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PABPC3Q9H361 631 aaKnown RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 TRABDQ9H4I3 376 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 C10orf88Q9H8K7 445 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 NOD2Q9HC29 1040 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 FBRSL1Q9HCM7 1045 aaKnown RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CD320Q9NPF0 282 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 ZDHHC4Q9NPG8 344 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PRSS16Q9NQE7 514 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 RAD18Q9NS91 495 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 KCTD5Q9NXV2 234 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 BFARQ9NZS9 450 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 DKK3Q9UBP4 350 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PHTF1Q9UMS5 762 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 PCDHB9Q9Y5E1 797 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 RAI2Q9Y5P3 530 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 DOCK4Q8N1I0 1966 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 CDH23Q9H251 3354 aa5.01□□□□□ -1.61
CCDC140-202ENST00000440903 MUC22E2RYF6 1773 aaPredicted RBP5.01□□□□□ -1.61
CCDC140-202ENST00000440903 NYNRINQ9P2P1 1898 aaKnown RBP5□□□□□ -1.61
CCDC140-202ENST00000440903 MIA3Q5JRA6 1907 aa5□□□□□ -1.61
CCDC140-202ENST00000440903 CCDC163A0A0D9SF12 145 aa5□□□□□ -1.61
CCDC140-202ENST00000440903 TSPAN11A1L157 253 aa5□□□□□ -1.61
CCDC140-202ENST00000440903 HEATR9A2RTY3 570 aa5□□□□□ -1.61
CCDC140-202ENST00000440903 CAPN8A6NHC0 703 aa5□□□□□ -1.61
CCDC140-202ENST00000440903 C2orf81A6NN90 581 aa5□□□□□ -1.61
CCDC140-202ENST00000440903 C16orf96A6NNT2 1141 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms