RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 H3BQ06 376 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 SOX1O00570 391 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 TYROBPO43914 113 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 SHOX2O60902 331 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 PAPSS2O95340 614 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 RPA3P35244 121 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 CSNK1DP48730 415 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 ZNF140P52738 457 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 THOC5Q13769 683 aaKnown RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 PTAR1Q7Z6K3 402 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 PCDH20Q8N6Y1 951 aaKnown RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 SMRP1Q8NCR6 262 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 ACVR1CQ8NER5 493 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 OR6P1Q8NGX9 317 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 GRIN3AQ8TCU5 1115 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 PIH1D2Q8WWB5 315 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 TBATAQ96M53 351 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 CEP44Q9C0F1 390 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 PCMTD2Q9NV79 361 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 INTS9Q9NV88 658 aaKnown RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 POLR3BQ9NW08 1133 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 CXorf51AA0A1B0GTR3 108 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.16■□□□□ 0.66
SNX17-203ENST00000440760 FAM47DPA6NHR8 397 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 TPP1O14773 563 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 TOP3BO95985 862 aaKnown RBP19.16■□□□□ 0.66
SNX17-203ENST00000440760 GSRP00390 522 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 ALDOAP04075 364 aaKnown RBP19.16■□□□□ 0.66
SNX17-203ENST00000440760 PSMC3P17980 439 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 GABRB3P28472 473 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 GDI1P31150 447 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 GMPRP36959 345 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 MTHFRP42898 656 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 MAPK8P45983 427 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 LIMK2P53671 638 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 PRAMEP78395 509 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 MYLK3Q32MK0 819 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 CARD16Q5EG05 197 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 LGSNQ5TDP6 509 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 GRAMD4Q6IC98 578 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 SH2D5Q6ZV89 423 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 CNTN4Q8IWV2 1026 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 OTUD6BQ8N6M0 293 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 GDAP1Q8TB36 358 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 PTPRN2Q92932 1015 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 CHFRQ96EP1 664 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 DEC1Q9P2X7 70 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 SLC27A6Q9Y2P4 619 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 TCF20Q9UGU0 1960 aaKnown RBP19.16■□□□□ 0.66
SNX17-203ENST00000440760 TICRRQ7Z2Z1 1910 aa19.16■□□□□ 0.66
SNX17-203ENST00000440760 ANTXRLA6NF34 631 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 PRPF4O43172 522 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX17-203ENST00000440760 HTRA2O43464 458 aaPredicted RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 SERPINA4P29622 427 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 GRIA4P48058 902 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 RUNX3Q13761 415 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 GRTP1Q5TC63 336 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 NEPROQ6NW34 567 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 CMC1Q7Z7K0 106 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 LDB1Q86U70 411 aaPredicted RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 CPA6Q8N4T0 437 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 BANPQ8N9N5 519 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 OR2A12Q8NGT7 310 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 FRS2Q8WU20 508 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 ELSPBP1Q96BH3 223 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 MTBPQ96DY7 904 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 CAB39LQ9H9S4 337 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 MARCH4Q9P2E8 410 aaPredicted RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 USP15Q9Y4E8 981 aaPredicted RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 SCN8AQ9UQD0 1980 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 SOCS5O75159 536 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 CRTAMO95727 393 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 UGT2B4P06133 528 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 DLDP09622 509 aaKnown RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 PRSS56P0CW18 603 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 LSP1P33241 339 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 PGGT1BP53609 377 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 SEMG2Q02383 582 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 ACVR1Q04771 509 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 TAF1AQ15573 450 aaPredicted RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 NLRP9Q7RTR0 991 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 DCLK2Q8N568 766 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 OR4K2Q8NGD2 314 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 WFIKKN2Q8TEU8 576 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 VPS39Q96JC1 886 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 MCMBPQ9BTE3 642 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 BPIFA1Q9NP55 256 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 FBXO6Q9NRD1 293 aaPredicted RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 NKIRAS1Q9NYS0 192 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 FNDC3AQ9Y2H6 1198 aaKnown RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 MTO1Q9Y2Z2 717 aaKnown RBP19.15■□□□□ 0.66
SNX17-203ENST00000440760 ZNF711Q9Y462 761 aa19.15■□□□□ 0.66
SNX17-203ENST00000440760 CCDC162PA2VCL2 907 aa19.14■□□□□ 0.65
SNX17-203ENST00000440760 RPP40O75818 363 aaKnown RBP19.14■□□□□ 0.65
SNX17-203ENST00000440760 GOT2P00505 430 aaKnown RBP19.14■□□□□ 0.65
SNX17-203ENST00000440760 AHSGP02765 367 aa19.14■□□□□ 0.65
SNX17-203ENST00000440760 CNTFP26441 200 aa19.14■□□□□ 0.65
SNX17-203ENST00000440760 GJA4P35212 333 aa19.14■□□□□ 0.65
SNX17-203ENST00000440760 OPRD1P41143 372 aa19.14■□□□□ 0.65
SNX17-203ENST00000440760 RGS19P49795 217 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms