RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 AOC1P19801 751 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 ADRA1AP35348 466 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 SERPINH1P50454 418 aaKnown RBP14.24□□□□□ -0.13
LIMD1-202ENST00000440097 MPP1Q00013 466 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 IRF9Q00978 393 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 FOLH1Q04609 750 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 GRM3Q14832 879 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 OR7D4Q8NG98 312 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 PRICKLE1Q96MT3 831 aaPredicted RBP14.24□□□□□ -0.13
LIMD1-202ENST00000440097 PLEKHG4BQ96PX9 1271 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 YME1L1Q96TA2 773 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 EMCNQ9ULC0 261 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 DOCK4Q8N1I0 1966 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 C2orf78A6NCI8 922 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 BIRC5O15392 142 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 PHGDHO43175 533 aaKnown RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 CCNT2O60583 730 aaKnown RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 GSRP00390 522 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 RAG1P15918 1043 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 MAPKAPK2P49137 400 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 YBEYP58557 167 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 XIAPP98170 497 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 IL10RBQ08334 325 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 TWF1Q12792 350 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 ITGA9Q13797 1035 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 GRAMD1BQ3KR37 738 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 RABGAP1LQ5R372 815 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 SH2D4BQ5SQS7 431 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 C10orf107Q8IVU9 208 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 SPNS2Q8IVW8 549 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 NSMCE4AQ9NXX6 385 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 SPTBN5Q9NRC6 3674 aaKnown RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 CCDC160A6NGH7 325 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 C2P06681 752 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 CSE1LP55060 971 aaKnown RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 HPCAP84074 193 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 UGP2Q16851 508 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 ACBD5Q5T8D3 534 aaPredicted RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 B3GNT6Q6ZMB0 384 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 ATG14Q6ZNE5 492 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 PLD6Q8N2A8 252 aaKnown RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 EFCAB3Q8N7B9 438 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 OR6P1Q8NGX9 317 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 BHMTQ93088 406 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 PAWRQ96IZ0 340 aaKnown RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 GCNAQ96QF7 691 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 SHCBP1LQ9BZQ2 653 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 POLR1EQ9GZS1 481 aaKnown RBP14.23□□□□□ -0.13
LIMD1-202ENST00000440097 VPS45Q9NRW7 570 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 ACTL7AQ9Y615 435 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 TANC1Q9C0D5 1861 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 GREB1Q4ZG55 1949 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 VCANP13611 3396 aa14.23□□□□□ -0.13
LIMD1-202ENST00000440097 HEATR9A2RTY3 570 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 SNNO75324 88 aaPredicted RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 AHSGP02765 367 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 HMGA1P17096 107 aaKnown RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 TBL3Q12788 808 aaKnown RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 C16orf59Q7L2K0 433 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 OTOP2Q7RTS6 562 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 ZC3HC1Q86WB0 502 aaKnown RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 ICA1LQ8NDH6 482 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 EXOC2Q96KP1 924 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 RNF38Q9H0F5 515 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 TASP1Q9H6P5 420 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 DDX18Q9NVP1 670 aaKnown RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 GMEB1Q9Y692 573 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 MYO9BQ13459 2157 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 ABHD14A-ACY1A0A1B0GW23 586 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 LYPLA1O75608 230 aaPredicted RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 PROCP04070 461 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 MPOP05164 745 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 CPA3P15088 417 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 GLRBP48167 497 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 SLC12A2P55011 1212 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 GNA12Q03113 381 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 CDK18Q07002 472 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 MTA1Q13330 715 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 TMEM259Q4ZIN3 620 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 KLHDC10Q6PID8 442 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 KDELC1Q6UW63 502 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 SLC41A1Q8IVJ1 513 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 BBS5Q8N3I7 341 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 PGBD5Q8N414 524 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 PIP4K2CQ8TBX8 421 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 BLOC1S5Q8TDH9 187 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 SCYL1Q96KG9 808 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 RHOJQ9H4E5 214 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 THAP1Q9NVV9 213 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 SPG21Q9NZD8 308 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 COPG2Q9UBF2 871 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 CAPN8A6NHC0 703 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 ZBBXA8MT70 800 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 CBX4O00257 560 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 CCL22O00626 93 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 AP1G1O43747 822 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 STC2O76061 302 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 KLKB1P03952 638 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 PRKCGP05129 697 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms