RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MLPHQ9BV36 600 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-204ENST00000440083 KCNH6Q9H252 994 aa14.68□□□□□ -0.06
TNFRSF1A-204ENST00000440083 TRABDQ9H4I3 376 aa14.68□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ATP13A1Q9HD20 1204 aa14.68□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CD93Q9NPY3 652 aa14.68□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CASS4Q9NQ75 786 aa14.68□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SYBUQ9NX95 663 aa14.68□□□□□ -0.06
TNFRSF1A-204ENST00000440083 INVSQ9Y283 1065 aa14.68□□□□□ -0.06
TNFRSF1A-204ENST00000440083 FANCMQ8IYD8 2048 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 WDR87Q6ZQQ6 2873 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 TMEM120BA0PK00 339 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SRRM3A6NNA2 597 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CBX4O00257 560 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 AXIN1O15169 862 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SIN3BO75182 1162 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ZMPSTE24O75844 475 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 NDUFV2P19404 249 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 NPY2RP49146 381 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ST8SIA6P61647 398 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ARF5P84085 180 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 PPARDQ03181 441 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CDH17Q12864 832 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 STARD3Q14849 445 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SPANXN3Q5MJ09 141 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MARC1Q5VT66 337 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 STEAP4Q687X5 459 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 KCTD11Q693B1 232 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 IL31Q6EBC2 164 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 RASSF3Q86WH2 238 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 BBS5Q8N3I7 341 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ANKRD42Q8N9B4 389 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 DCAKDQ8WVC6 231 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SLC44A1Q8WWI5 657 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 TBL1YQ9BQ87 522 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 GORASP1Q9BQQ3 440 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 POLMQ9NP87 494 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ZSCAN32Q9NX65 697 aa14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SMG5Q9UPR3 1016 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ERICH4A6NGS2 130 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 NPC1O15118 1278 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SMAD6O43541 496 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SYNCRIPO60506 623 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 USP12O75317 370 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 POLBP06746 335 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SRPRAP08240 638 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 HOXA6P31267 233 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 COPAP53621 1224 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 NHLH1Q02575 133 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SULT2A1Q06520 285 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ITKQ08881 620 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 NAB1Q13506 487 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 HNRNPDQ14103 355 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 TMCO4Q5TGY1 634 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 KIAA1324Q6UXG2 1013 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ZNF783Q6ZMS7 281 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 TAX1BP1Q86VP1 789 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 WDR5BQ86VZ2 330 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 LONP2Q86WA8 852 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SLC26A11Q86WA9 606 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 LRRC6Q86X45 466 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 PGBD3Q8N328 593 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CAMKK1Q8N5S9 505 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CNTD1Q8N815 330 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 IPMKQ8NFU5 416 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MDM1Q8TC05 714 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MGARPQ8TDB4 240 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 FRS2Q8WU20 508 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 OXNAD1Q96HP4 312 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 FICDQ9BVA6 458 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 C2orf49Q9BVC5 232 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 FSD1LQ9BXM9 530 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ACE2Q9BYF1 805 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MKRN2Q9H000 416 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 NT5MQ9NPB1 228 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 PPANQ9NQ55 473 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 PRSS16Q9NQE7 514 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 PIH1D1Q9NWS0 290 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 UBP1Q9NZI7 540 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SLC25A13Q9UJS0 675 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SDK1Q7Z5N4 2213 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MYLKQ15746 1914 aa14.66□□□□□ -0.06
TNFRSF1A-204ENST00000440083 FAM159BA6NKW6 160 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 HRO43593 1189 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 KRT37O76014 449 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ALDH1A2O94788 518 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MT-ND3P03897 115 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SRCP12931 536 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SERPINB9P50453 376 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CRADDP78560 199 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 MPP3Q13368 585 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 SERINC3Q13530 473 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CAMK2GQ13555 558 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 ZNF235Q14590 738 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 CRYMQ14894 314 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 HNRNPA1L2Q32P51 320 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 C9orf64Q5T6V5 341 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 Q6ZVU0 165 aa14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 PRPF39Q86UA1 669 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-204ENST00000440083 KLHDC8BQ8IXV7 354 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms