RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FSCN3Q9NQT6 498 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 KLHL8Q9P2G9 620 aaPredicted RBP11.88□□□□□ -0.51
HSPG2-206ENST00000439717 LAMA1P25391 3075 aa11.88□□□□□ -0.51
HSPG2-206ENST00000439717 PLXNA2O75051 1894 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 PTPRZ1P23471 2315 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-206ENST00000439717 C4orf47A7E2U8 309 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 TOR1BO14657 336 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 FPGTO14772 594 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 LZTS3O60299 673 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-206ENST00000439717 OPHN1O60890 802 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 STK10O94804 968 aaKnown RBP11.87□□□□□ -0.51
HSPG2-206ENST00000439717 PRKCGP05129 697 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 PDHA1P08559 390 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 ELFN1P0C7U0 828 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 ZNF883P0CG24 379 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 C6P13671 934 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 RBL1P28749 1068 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 VIPR1P32241 457 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 EPHB1P54762 984 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 RALGDSQ12967 914 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 SLC14A1Q13336 389 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 ZNF423Q2M1K9 1284 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 HLA-BQ31612 363 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 DARS2Q6PI48 645 aaKnown RBP11.87□□□□□ -0.51
HSPG2-206ENST00000439717 LIPIQ6XZB0 460 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 KYAT3Q6YP21 454 aaKnown RBP11.87□□□□□ -0.51
HSPG2-206ENST00000439717 GCNT7Q6ZNI0 430 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 PID1Q7Z2X4 250 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 ABI3BPQ7Z7G0 1075 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 OXR1Q8N573 874 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.87□□□□□ -0.51
HSPG2-206ENST00000439717 CENPTQ96BT3 561 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 KLHDC7BQ96G42 594 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 MCCC1Q96RQ3 725 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-206ENST00000439717 KLF6Q99612 283 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-206ENST00000439717 TLR10Q9BXR5 811 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 ADGRE3Q9BY15 652 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 GAREM1Q9H706 876 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 ERVMER34-1Q9H9K5 563 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 FZD3Q9NPG1 666 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 GDF3Q9NR23 364 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 KCTD5Q9NXV2 234 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 DLL3Q9NYJ7 618 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 B4GALT6Q9UBX8 382 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 DNPEPQ9ULA0 475 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 CHKBQ9Y259 395 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 SNX11Q9Y5W9 270 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 CFAP54Q96N23 3096 aa11.87□□□□□ -0.51
HSPG2-206ENST00000439717 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 A0A0J9YYE9 177 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 A6NNZ2 444 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 PSMD11O00231 422 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 KCNK3O14649 394 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 RAD51BO15315 384 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 HEXIM1O94992 359 aaKnown RBP11.86□□□□□ -0.51
HSPG2-206ENST00000439717 PRLP01236 227 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 TRBC1P01850 177 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 THEGLP0DJG4 465 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 MSNP26038 577 aaKnown RBP11.86□□□□□ -0.51
HSPG2-206ENST00000439717 CD68P34810 354 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-206ENST00000439717 RABIFP47224 123 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 NXPH1P58417 271 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 PUM1Q14671 1186 aaKnown RBP eCLIP11.86□□□□□ -0.51
HSPG2-206ENST00000439717 LRRC14Q15048 493 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 ITPRIPL1Q6GPH6 555 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 LAYNQ6UX15 382 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 SLC13A5Q86YT5 568 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-206ENST00000439717 RAVER1Q8IY67 606 aaKnown RBP11.86□□□□□ -0.51
HSPG2-206ENST00000439717 ZNF567Q8N184 647 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 TP53I13Q8NBR0 393 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-206ENST00000439717 RMDN1Q96DB5 314 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 BMFQ96LC9 184 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 FCRL5Q96RD9 977 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 RBM15Q96T37 977 aaKnown RBP eCLIP11.86□□□□□ -0.51
HSPG2-206ENST00000439717 MYOCQ99972 504 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 FAM153AQ9UHL3 310 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 PCDHGB2Q9Y5G2 931 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 GON4LQ3T8J9 2241 aa11.86□□□□□ -0.51
HSPG2-206ENST00000439717 DMXL1Q9Y485 3027 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 CAPN8A6NHC0 703 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 NPIPB15A6NHN6 443 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-206ENST00000439717 ANKRD66B4E2M5 251 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 TM4SF5O14894 197 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 YKT6O15498 198 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 KCNN4O15554 427 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 KIF5CO60282 957 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 EPOP01588 193 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 ZNF30P17039 623 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 NFKB1P19838 968 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 HNF1BP35680 557 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 PI4KAP42356 2102 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 ID4P47928 161 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 CLDN2P57739 230 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 PFN3P60673 137 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 YPEL5P62699 121 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 SEMG2Q02383 582 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 CDK18Q07002 472 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 ARHGEF7Q14155 803 aa11.85□□□□□ -0.51
HSPG2-206ENST00000439717 CNGA3Q16281 694 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms