RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 KIAA1524Q8TCG1 905 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 P3H4Q92791 437 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 SCRN2Q96FV2 425 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 FERMT1Q9BQL6 677 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 DUSP23Q9BVJ7 150 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 BTBD3Q9Y2F9 522 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 PCDHGA1Q9Y5H4 931 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 ZNF292O60281 2723 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 SPTBN4Q9H254 2564 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 TTC24A2A3L6 582 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-216ENST00000439475 C3orf70A6NLC5 250 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-216ENST00000439475 PSMD11O00231 422 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 CACNB4O00305 520 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-216ENST00000439475 PJA2O43164 708 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 MTSS1O43312 755 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 NRDCO43847 1150 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 CST8O60676 142 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 PIAS2O75928 621 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 RECQL5O94762 991 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-216ENST00000439475 CSF2P04141 144 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 PRKCGP05129 697 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 C1SP09871 688 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 JUNDP17535 347 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 KELP23276 732 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 DGKAP23743 735 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 IGFALSP35858 605 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 COPS2P61201 443 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 DYNLT1P63172 113 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 IFI35P80217 286 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-216ENST00000439475 DAB2P98082 770 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 PPARDQ03181 441 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 TRAF2Q12933 501 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 MTM1Q13496 603 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 WSCD2Q2TBF2 565 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 TFDP3Q5H9I0 405 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 FAXCQ5TGI0 409 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 CCDC181Q5TID7 509 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 CCDC70Q6NSX1 233 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 ENPP7Q6UWV6 458 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 SPOCD1Q6ZMY3 1216 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 ZSWIM9Q86XI8 627 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 GALNT15Q8N3T1 639 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 BAHD1Q8TBE0 780 aaPredicted RBP10.51□□□□□ -0.73
MCF2L-216ENST00000439475 UBE2Q2Q8WVN8 375 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 LGMNQ99538 433 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 IL12RB2Q99665 862 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 APOOQ9BUR5 198 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 SCNM1Q9BWG6 230 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 SLC13A1Q9BZW2 595 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 MBNL1Q9NR56 388 aaKnown RBP10.51□□□□□ -0.73
MCF2L-216ENST00000439475 GPR27Q9NS67 375 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 SPASTQ9UBP0 616 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 B4GALT6Q9UBX8 382 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 AMFRQ9UKV5 643 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 TFR2Q9UP52 801 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 COQ6Q9Y2Z9 468 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 PPIL1Q9Y3C6 166 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 CSNK1G3Q9Y6M4 447 aa10.51□□□□□ -0.73
MCF2L-216ENST00000439475 CCDC66A2RUB6 948 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 A8MX80 341 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 KCNK1O00180 336 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 SCAMP1O15126 338 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 SDC3O75056 442 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 TNFP01375 233 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 PCCBP05166 539 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 HLA-DQB2P05538 268 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ATXN1LP0C7T5 689 aaKnown RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 CTSEP14091 401 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 NME1P15531 152 aaKnown RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ZNF30P17039 623 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 CKMT2P17540 419 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 CDKN2BP42772 138 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 TNNT3P45378 269 aaPredicted RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 DUSP3P51452 185 aaPredicted RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 RWDD2BP57060 319 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 RPL26P61254 145 aaKnown RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 SEMG2Q02383 582 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 DSC2Q02487 901 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 RALGDSQ12967 914 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ZNF211Q13398 564 aaPredicted RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ILKQ13418 452 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 FZD2Q14332 565 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 INPP5AQ14642 412 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 IRF4Q15306 451 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 PPP2R5EQ16537 467 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 TEX44Q53QW1 395 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ZNF542PQ5EBM4 170 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ALG1LQ6GMV1 187 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 MACC1Q6ZN28 852 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 NT5DC3Q86UY8 548 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 RAVER1Q8IY67 606 aaKnown RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 SLC22A18ASQ8N1D0 253 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 CHCHD4Q8N4Q1 142 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ACRBPQ8NEB7 543 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 TFB1MQ8WVM0 346 aaKnown RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 SCG3Q8WXD2 468 aaKnown RBP10.5□□□□□ -0.73
MCF2L-216ENST00000439475 GLMNQ92990 594 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 TBATAQ96M53 351 aa10.5□□□□□ -0.73
MCF2L-216ENST00000439475 ADGRE3Q9BY15 652 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms