RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CLPBQ9H078 707 aa18.56■□□□□ 0.56
AC004540.1-201ENST00000439120 CBX8Q9HC52 389 aa18.56■□□□□ 0.56
AC004540.1-201ENST00000439120 SIRPGQ9P1W8 387 aa18.56■□□□□ 0.56
AC004540.1-201ENST00000439120 GULP1Q9UBP9 304 aa18.56■□□□□ 0.56
AC004540.1-201ENST00000439120 PNMA8BQ9ULN7 279 aaPredicted RBP18.56■□□□□ 0.56
AC004540.1-201ENST00000439120 CACNB4O00305 520 aaPredicted RBP18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 SERPING1P05155 500 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 AMPD1P23109 780 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 NFKBIAP25963 317 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 IL1R2P27930 398 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 SERPINB6P35237 376 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 SSR1P43307 286 aaKnown RBP18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 PCBP4P57723 403 aaKnown RBP18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 SRP54P61011 504 aaKnown RBP18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 SLC10A7Q0GE19 358 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 CCDC173Q0VFZ6 552 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 ISXQ2M1V0 245 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 ALG11Q2TAA5 492 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 GKN2Q86XP6 184 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 ATPAF2Q8N5M1 289 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 WDR48Q8TAF3 677 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 PDCD6IPQ8WUM4 868 aaKnown RBP18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 SYN2Q92777 582 aaPredicted RBP18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 ECHDC3Q96DC8 303 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 IQCDQ96DY2 449 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 CRELD1Q96HD1 420 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 ZNF578Q96N58 590 aaPredicted RBP18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 POLR1BQ9H9Y6 1135 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 IP6K2Q9UHH9 426 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 ANAPC7Q9UJX3 599 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 PADI4Q9UM07 663 aa18.55■□□□□ 0.56
AC004540.1-201ENST00000439120 RECQL5O94762 991 aaPredicted RBP18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 TNFP01375 233 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 RARAP10276 462 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 KELP23276 732 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 HSPA9P38646 679 aaKnown RBP18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 COL9A2Q14055 689 aaPredicted RBP18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 KRT81Q14533 505 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 ACOX1Q15067 660 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 PERM1Q5SV97 790 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 HGSNATQ68CP4 663 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 LVRNQ6Q4G3 990 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 LIPIQ6XZB0 460 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 DPPA4Q7L190 304 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 POLNQ7Z5Q5 900 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 TP53INP2Q8IXH6 220 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 SDR16C5Q8N3Y7 309 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 ARL10Q8N8L6 244 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 ZNF248Q8NDW4 579 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 PCDH19Q8TAB3 1148 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 GRAMD1AQ96CP6 724 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 CSPG4P5Q96PW8 444 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 CCDC3Q9BQI4 270 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 NUP85Q9BW27 656 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 THAP2Q9H0W7 228 aa18.54■□□□□ 0.56
AC004540.1-201ENST00000439120 A0A1W2PQ67 120 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 A8MX80 341 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 TCEA3O75764 348 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 CELA2BP08218 269 aaPredicted RBP18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 TCF4P15884 667 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 LSSP48449 732 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 ZBED6P86452 979 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 RALGDSQ12967 914 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 SPIDRQ14159 915 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 C3orf38Q5JPI3 329 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 PLA2G15Q8NCC3 412 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 TEKT4Q8WW24 435 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 THSD1Q9NS62 852 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 GPR34Q9UPC5 381 aa18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 LUC7L2Q9Y383 392 aaKnown RBP18.53■□□□□ 0.56
AC004540.1-201ENST00000439120 MYO1FO00160 1098 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 TRAFD1O14545 582 aaPredicted RBP18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 SOCS5O75159 536 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 CPP00450 1065 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 RBMS1P29558 406 aaKnown RBP18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 CDH6P55285 790 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 KIAA1024LP59773 190 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 HADHQ16836 314 aaKnown RBP18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 SOWAHCQ53LP3 525 aaPredicted RBP18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 BROXQ5VW32 411 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 FOXR1Q6PIV2 292 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 NIPA2Q8N8Q9 360 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 KYQ8NBH2 561 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 OR56A4Q8NGH8 313 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 PDXPQ96GD0 296 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 ATXN7L3BQ96GX2 97 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 NAF1Q96HR8 494 aaKnown RBP18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 BTBD6Q96KE9 485 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 FCRL3Q96P31 734 aaPredicted RBP18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 NUDCD1Q96RS6 583 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 WDR26Q9H7D7 661 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 PCDH18Q9HCL0 1135 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 ETNK2Q9NVF9 386 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 MOSPD1Q9UJG1 213 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 CAPN11Q9UMQ6 739 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 SATB2Q9UPW6 733 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 PCDHGC4Q9Y5F7 938 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 LRP4O75096 1905 aa18.52■□□□□ 0.56
AC004540.1-201ENST00000439120 TTC24A2A3L6 582 aaPredicted RBP18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 DXOO77932 396 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms