RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 A0A075B6Q4 140 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 TLR5O60602 858 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 TRMT5Q32P41 509 aaKnown RBP13.82□□□□□ -0.2
LRCH3-206ENST00000438796 TBC1D25Q3MII6 688 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 LGMNQ99538 433 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 SNRNP25Q9BV90 132 aaKnown RBP13.82□□□□□ -0.2
LRCH3-206ENST00000438796 PORCNQ9H237 461 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 CPS1P31327 1500 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 TPP2P29144 1249 aaPredicted RBP13.82□□□□□ -0.2
LRCH3-206ENST00000438796 PRKAA2P54646 552 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 JAZF1Q86VZ6 243 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 ZNF540Q8NDQ6 660 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 METTL21AQ8WXB1 218 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 KAT2AQ92830 837 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 FCRL4Q96PJ5 515 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 SPATA5L1Q9BVQ7 753 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 ATP6AP2A0A1C7CYW4 349 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
LRCH3-206ENST00000438796 ATP6AP2O75787 350 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 PPP2R2BQ00005 443 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 ZNF155Q12901 538 aaPredicted RBP13.82□□□□□ -0.2
LRCH3-206ENST00000438796 SAMD4BQ5PRF9 694 aaKnown RBP13.82□□□□□ -0.2
LRCH3-206ENST00000438796 LYPLAL1Q5VWZ2 237 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 CST1P01037 141 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 EPHX1P07099 455 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 HNRNPLP14866 589 aaKnown RBP eCLIP13.82□□□□□ -0.22e-6■■■■□ 21
LRCH3-206ENST00000438796 PRKG2Q13237 762 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 PTPN20Q4JDL3 420 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 C9orf64Q5T6V5 341 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 IKBIPQ70UQ0 350 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 NANOGNBQ7Z5D8 188 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 ADGRG6Q86SQ4 1221 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 CADM2Q8N3J6 435 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 HDAC10Q969S8 669 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 RASSF1Q9NS23 344 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 MARK1Q9P0L2 795 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 PNPLA6Q8IY17 1366 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 MSCO60682 206 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 CABYRO75952 493 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 LNX2Q8N448 690 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 PTPN18Q99952 460 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 UBAP1Q9NZ09 502 aa13.82□□□□□ -0.2
LRCH3-206ENST00000438796 H3BNH8 94 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 AREL1O15033 823 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 GLRA2P23416 452 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 UGT1A5P35504 534 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 STARP49675 285 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 CORO7P57737 925 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 LGALS3BPQ08380 585 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 UBXN2BQ14CS0 331 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 LINGO4Q6UY18 593 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 GALNT5Q7Z7M9 940 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 SLC47A1Q96FL8 570 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 ULK1O75385 1050 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 VIPP01282 170 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 CTSOP43234 321 aaPredicted RBP13.81□□□□□ -0.2
LRCH3-206ENST00000438796 NAGLUP54802 743 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 PUDPQ08623 228 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 FSTL1Q12841 308 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 GPRIN3Q6ZVF9 776 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 SLC9A6Q92581 669 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 MTMR9Q96QG7 549 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 DPEP2Q9H4A9 486 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 GOLGA2P5Q9HBQ8 144 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 EGFL7Q9UHF1 273 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 RPS6KA6Q9UK32 745 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 PXDNLA1KZ92 1463 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 FAM237BA0A1B0GVD1 139 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 BTN3A3O00478 584 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 B4GALT5O43286 388 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 ERVK-21P61565 698 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 BHLHB9Q6PI77 547 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 OR2L5Q8NG80 312 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 ZCCHC10Q8TBK6 192 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 CD99L2Q8TCZ2 262 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 DNASE1L2Q92874 299 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 SLC6A2P23975 617 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 SSR2P43308 183 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 SPESP1Q6UW49 350 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 ZPBP2Q6X784 338 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 RIOX2Q8IUF8 465 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 NKAPQ8N5F7 415 aaKnown RBP13.81□□□□□ -0.2
LRCH3-206ENST00000438796 FBXO15Q8NCQ5 510 aaPredicted RBP13.81□□□□□ -0.2
LRCH3-206ENST00000438796 PPCDCQ96CD2 204 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 OR52E6Q96RD3 313 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 GAL3ST4Q96RP7 486 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 A0A0A0MRY4 1105 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 PCDH1Q08174 1060 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 TREML2Q5T2D2 321 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 CATSPERGQ6ZRH7 1159 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 KBTBD7Q8WVZ9 684 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 C18orf25Q96B23 403 aaPredicted RBP13.81□□□□□ -0.2
LRCH3-206ENST00000438796 SPATA13Q96N96 652 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 U3KQV3 271 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 KPNA4O00629 521 aaPredicted RBP13.81□□□□□ -0.2
LRCH3-206ENST00000438796 ADRA1DP25100 572 aa13.81□□□□□ -0.2
LRCH3-206ENST00000438796 TKTP29401 623 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms