RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 APOOQ9BUR5 198 aa11.16□□□□□ -0.62
RTN4-211ENST00000438462 TNKS2Q9H2K2 1166 aa11.16□□□□□ -0.62
RTN4-211ENST00000438462 NOTCH1P46531 2555 aa11.16□□□□□ -0.62
RTN4-211ENST00000438462 ZNF233A6NK53 670 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 SLC26A4O43511 780 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 CREB3O43889 395 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 TM7SF2O76062 418 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 ZBED1O96006 694 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
RTN4-211ENST00000438462 RRM1P23921 792 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 TKTL1P51854 596 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 DGKQP52824 942 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 RRADP55042 308 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 TBX4P57082 545 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 KLHL40Q2TBA0 621 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 TMEM119Q4V9L6 283 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 RAB41Q5JT25 222 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 L1TD1Q5T7N2 865 aaKnown RBP11.15□□□□□ -0.62
RTN4-211ENST00000438462 WDR74Q6RFH5 385 aaPredicted RBP11.15□□□□□ -0.62
RTN4-211ENST00000438462 DPY19L3Q6ZPD9 716 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 UNC93AQ86WB7 457 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 CCAR2Q8N163 923 aaKnown RBP11.15□□□□□ -0.62
RTN4-211ENST00000438462 ARFGAP1Q8N6T3 406 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 UBR7Q8N806 425 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 OR52K2Q8NGK3 314 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 OR10G6Q8NH81 332 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 ALG14Q96F25 216 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 SGSM3Q96HU1 749 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 ACCSQ96QU6 501 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 OR6C1Q96RD1 312 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 STRA6Q9BX79 667 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 VRTNQ9H8Y1 702 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 HS3ST2Q9Y278 367 aa11.15□□□□□ -0.62
RTN4-211ENST00000438462 PIKFYVEQ9Y2I7 2098 aa11.15□□□□□ -0.63
RTN4-211ENST00000438462 TMEM202A6NGA9 273 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 RASA4BC9J798 803 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 RASA4O43374 803 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 MMP20O60882 483 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 SPAG6O75602 509 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 CTDNEP1O95476 244 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 MOCS2O96007 188 aaPredicted RBP11.14□□□□□ -0.63
RTN4-211ENST00000438462 TRIM21P19474 475 aaKnown RBP11.14□□□□□ -0.63
RTN4-211ENST00000438462 SPAM1P38567 509 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 VAV2P52735 878 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 SH3BP2P78314 561 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 ATP1A4Q13733 1029 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 MYBPC3Q14896 1274 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 BSPRYQ5W0U4 402 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 RAP1GAP2Q684P5 730 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 FCRL6Q6DN72 434 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 C22orf39Q6P5X5 142 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 TMEM207Q6UWW9 146 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 C16orf47Q6ZP98 133 aaPredicted RBP11.14□□□□□ -0.63
RTN4-211ENST00000438462 PIGZQ86VD9 579 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 SYCP3Q8IZU3 236 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 BCORP1Q8N888 145 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 OR56A4Q8NGH8 313 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 COX4I2Q96KJ9 171 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 AGAP3Q96P47 875 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 ZNF552Q9H707 407 aaPredicted RBP11.14□□□□□ -0.63
RTN4-211ENST00000438462 DNAJB12Q9NXW2 375 aaKnown RBP11.14□□□□□ -0.63
RTN4-211ENST00000438462 XPO7Q9UIA9 1087 aaKnown RBP11.14□□□□□ -0.63
RTN4-211ENST00000438462 VPS28Q9UK41 221 aa11.14□□□□□ -0.63
RTN4-211ENST00000438462 FARSAQ9Y285 508 aaKnown RBP11.14□□□□□ -0.63
RTN4-211ENST00000438462 YJEFN3A6XGL0 299 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 E7ENQ6 273 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 SMAD6O43541 496 aaKnown RBP11.13□□□□□ -0.63
RTN4-211ENST00000438462 CRLF1O75462 422 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 ZWINTO95229 277 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 TIAF1O95411 115 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 CCNB1P14635 433 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 TIMP2P16035 220 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 IGFBP2P18065 325 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 TRIM29Q14134 588 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 INPP5AQ14642 412 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 HIF1AQ16665 826 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 LRRC73Q5JTD7 316 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 FAM69BQ5VUD6 431 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 PM20D1Q6GTS8 502 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 MSANTD2Q6P1R3 559 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 CHSY1Q86X52 802 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 ACRBPQ8NEB7 543 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 NCSTNQ92542 709 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 KCNB2Q92953 911 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 RAB7BQ96AH8 199 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 FCRL2Q96LA5 508 aaPredicted RBP11.13□□□□□ -0.63
RTN4-211ENST00000438462 TAAR2Q9P1P5 351 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 ZNF281Q9Y2X9 895 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 COQ6Q9Y2Z9 468 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
RTN4-211ENST00000438462 A0A0G2JK05 382 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 IPO13O94829 963 aaKnown RBP11.12□□□□□ -0.63
RTN4-211ENST00000438462 ENDOD1O94919 500 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 PCCBP05166 539 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 ESRRAP11474 423 aaPredicted RBP11.12□□□□□ -0.63
RTN4-211ENST00000438462 TACR2P21452 398 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 HOXC12P31275 282 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 IL11RAQ14626 422 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 LRRC14Q15048 493 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms