RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SLC26A3P40879 764 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 HK2P52789 917 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 ZNF460Q14592 562 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 FAM83EQ2M2I3 478 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 LILRA6Q6PI73 481 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 TTC7BQ86TV6 843 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 CARNMT1Q8N4J0 409 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 SCG3Q8WXD2 468 aaKnown RBP25.8■■□□□ 1.72
CPNE1-216ENST00000437340 PRR11Q96HE9 360 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-216ENST00000437340 DNAJC1Q96KC8 554 aaKnown RBP25.8■■□□□ 1.72
CPNE1-216ENST00000437340 PNPOQ9NVS9 261 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 LSM7Q9UK45 103 aaKnown RBP25.8■■□□□ 1.72
CPNE1-216ENST00000437340 VWA7Q9Y334 891 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 CAPN14A8MX76 684 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 CD160O95971 181 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 OGNP20774 298 aaKnown RBP25.79■■□□□ 1.72
CPNE1-216ENST00000437340 PSMA3P25788 255 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 GLRBP48167 497 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 SLC7A9P82251 487 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 DLG1Q12959 904 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 RALGPS1Q5JS13 557 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 C9orf50Q5SZB4 431 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 HECTD2Q5U5R9 776 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 NSMCE3Q96MG7 304 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 OLFM1Q99784 485 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 EBF4Q9BQW3 602 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 LRRC3Q9BY71 257 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 DRC3Q9H069 523 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 XPR1Q9UBH6 696 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 APOBEC2Q9Y235 224 aaKnown RBP25.79■■□□□ 1.72
CPNE1-216ENST00000437340 ZNF195O14628 629 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 CD3EAPO15446 510 aaKnown RBP25.79■■□□□ 1.72
CPNE1-216ENST00000437340 TMCC1O94876 653 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 GOT2P00505 430 aaKnown RBP25.79■■□□□ 1.72
CPNE1-216ENST00000437340 PRLP01236 227 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 SPATA31D3P0C874 917 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 PGGT1BP53609 377 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 ZXDBP98169 803 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 TAF1AQ15573 450 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-216ENST00000437340 AGAP9Q5VTM2 703 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 SPATA31D4Q6ZUB0 917 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 GAREM2Q75VX8 874 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 TMC8Q8IU68 726 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 UTP4Q969X6 686 aaKnown RBP25.79■■□□□ 1.72
CPNE1-216ENST00000437340 NDNQ99608 321 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 FEM1AQ9BSK4 669 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 TBC1D10AQ9BXI6 508 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 IGSF5Q9NSI5 407 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 NLE1Q9NVX2 485 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-216ENST00000437340 OR51B4Q9Y5P0 310 aa25.79■■□□□ 1.72
CPNE1-216ENST00000437340 ATP6V1G2O95670 118 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 ADH1AP07327 375 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 PFKLP17858 780 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 CA8P35219 290 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 TUBB3Q13509 450 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 FAM45BPQ6NSW5 357 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 HTR3DQ70Z44 454 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 KLHL23Q8NBE8 558 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 OR4L1Q8NH43 312 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 FAM45AQ8TCE6 357 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 HEXDCQ8WVB3 486 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 RMDN1Q96DB5 314 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 EXOC2Q96KP1 924 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 ADGRE3Q9BY15 652 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 CDH19Q9H159 772 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 MARCH4Q9P2E8 410 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-216ENST00000437340 STK38LQ9Y2H1 464 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 RAI2Q9Y5P3 530 aa25.78■■□□□ 1.72
CPNE1-216ENST00000437340 CCDC162PA2VCL2 907 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 SNUPNO95149 360 aaKnown RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 ESRRAP11474 423 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 GRIA4P48058 902 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 ZNF140P52738 457 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 FSCBQ5H9T9 825 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 SDCCAG8Q86SQ7 713 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 CPXM2Q8N436 756 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 DCAF4L2Q8NA75 395 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 OR13C4Q8NGS5 318 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 BTBD10Q9BSF8 475 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 ILKAPQ9H0C8 392 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 GPAMQ9HCL2 828 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 CATSPERZQ9NTU4 200 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 DNMT3BQ9UBC3 853 aaKnown RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 VPS28Q9UK41 221 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 OBSL1O75147 1896 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 OR51F1A6NGY5 319 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 CCL22O00626 93 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 DLX3O60479 287 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 SNAP91O60641 907 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 CXCL14O95715 111 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 LTA4HP09960 611 aaKnown RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 MZF1P28698 734 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 CDC25CP30307 473 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 MAGEA10P43363 369 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 CDH18Q13634 790 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 RCN2Q14257 317 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 KLC3Q6P597 504 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 MAVSQ7Z434 540 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 ELMOD1Q8N336 334 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms