RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ING1Q9UK53 422 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 LSM4Q9Y4Z0 139 aaKnown RBP4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 SRPRBQ9Y5M8 271 aaKnown RBP4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 A3GALT2U3KPV4 340 aa4.68□□□□□ -1.66
HMGB1P45-201ENST00000435986 SMIM35A0A1B0GVV1 85 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 LRRC72A6NJI9 287 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 CHL1O00533 1208 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 DKC1O60832 514 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 BCAR3O75815 825 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 HIST1H2ABP04908 130 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 DDX5P17844 614 aaKnown RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 HIST1H2ADP20671 130 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 MPGP29372 298 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 UBA7P41226 1012 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 ARHGAP25P42331 645 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 PRCPP42785 496 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 CAMPP49913 170 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 PLCD1P51178 756 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 EFNA5P52803 228 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 RAD23BP54727 409 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 MFAP4P55083 255 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 SORDQ00796 357 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 CEBPZQ03701 1054 aaKnown RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 FAM27E3Q08E93 113 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 ST3GAL1Q11201 340 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 IKQ13123 557 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 BECN1Q14457 450 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 INPP5JQ15735 1006 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 TMEM266Q2M3C6 531 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 COL28A1Q2UY09 1125 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 PCGF3Q3KNV8 242 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 JADE1Q6IE81 842 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 SLC18B1Q6NT16 456 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 HIST3H2AQ7L7L0 130 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 LINGO2Q7L985 606 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 TRIM74Q86UV6 250 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 TRIM73Q86UV7 250 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 SFTPA2Q8IWL1 248 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 PARP16Q8N5Y8 322 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 AVL9Q8NBF6 648 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 APPL2Q8NEU8 664 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 PIGOQ8TEQ8 1089 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 TMEM174Q8WUU8 243 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 LPAR1Q92633 364 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 TMEM18Q96B42 140 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 CNDP2Q96KP4 475 aaKnown RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 NUDCD1Q96RS6 583 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 SEPT5Q99719 369 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 BAG1Q99933 345 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 MRPL1Q9BYD6 325 aaKnown RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 LHPPQ9H008 270 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 MVB12BQ9H7P6 319 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 PSD3Q9NYI0 1048 aa4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 CWC15Q9P013 229 aaKnown RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 PPIEQ9UNP9 301 aaKnown RBP4.67□□□□□ -1.66
HMGB1P45-201ENST00000435986 ZMYM2Q9UBW7 1377 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 CTDSP2O14595 271 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 MDM4O15151 490 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 TLR2O60603 784 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 JRKO75564 520 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 OR2C1O95371 312 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 LATS1O95835 1130 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 APOA4P06727 396 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 ITGAXP20702 1163 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 EEF1DP29692 281 aaKnown RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 ACSL1P33121 698 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 GARSP41250 739 aaKnown RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 MATR3P43243 847 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 SLC15A1P46059 708 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 ENTPD1P49961 510 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 TMPRSS3P57727 454 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 NAE1Q13564 534 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 DAZAP2Q15038 168 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 ESCO2Q56NI9 601 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 MANEAQ5SRI9 462 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 LRRC8EQ6NSJ5 796 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 TRILQ7L0X0 811 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 ADGRA1Q86SQ6 560 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 DNAAF5Q86Y56 855 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 WDR63Q8IWG1 891 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 SYT2Q8N9I0 419 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 FAM98AQ8NCA5 519 aaKnown RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 HUS1BQ8NHY5 278 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 GABPB2Q8TAK5 448 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 PRPF31Q8WWY3 499 aaKnown RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 SNAPC3Q92966 411 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 ZKSCAN4Q969J2 545 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 EME1Q96AY2 570 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 MSI2Q96DH6 328 aaKnown RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 PABPC5Q96DU9 382 aaKnown RBP4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 AGAP2Q99490 1192 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 AP1M1Q9BXS5 423 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 TXLNGYQ9BZA5 131 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 PRSS22Q9GZN4 317 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 IKZF4Q9H2S9 585 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 RABEP2Q9H5N1 569 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 PDZD7Q9H5P4 517 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 CATSPERBQ9H7T0 1116 aa4.66□□□□□ -1.66
HMGB1P45-201ENST00000435986 ABI3Q9P2A4 366 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms