RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 PHTF1Q9UMS5 762 aa15.17■□□□□ 0.02
TMEM40-204ENST00000435218 FAM50BQ9Y247 325 aa15.17■□□□□ 0.02
TMEM40-204ENST00000435218 SPO11Q9Y5K1 396 aa15.17■□□□□ 0.02
TMEM40-204ENST00000435218 WASF2Q9Y6W5 498 aa15.17■□□□□ 0.02
TMEM40-204ENST00000435218 LRRK1Q38SD2 2015 aa15.17■□□□□ 0.02
TMEM40-204ENST00000435218 CXorf49A8MYA2 514 aaPredicted RBP15.16■□□□□ 0.02
TMEM40-204ENST00000435218 SPECC1L-ADORA2AF8WAN1 911 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 GLULP15104 373 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 GKP32189 559 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 GALK1P51570 392 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 EPHB1P54762 984 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 SEPT6Q14141 434 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 CNGA3Q16281 694 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 SKIDA1Q1XH10 827 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 FNDC3BQ53EP0 1204 aaKnown RBP15.16■□□□□ 0.02
TMEM40-204ENST00000435218 ESRP1Q6NXG1 681 aaKnown RBP15.16■□□□□ 0.02
TMEM40-204ENST00000435218 BRAT1Q6PJG6 821 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 GDPD4Q6W3E5 623 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 KCNMB4Q86W47 210 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 LMNTD2Q8IXW0 634 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 CHST14Q8NCH0 376 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 KCNV2Q8TDN2 545 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 ZDHHC6Q9H6R6 413 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 NSMCE4AQ9NXX6 385 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 ZFATQ9P243 1243 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 LIMD1Q9UGP4 676 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 HCN2Q9UL51 889 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 IKBKGQ9Y6K9 419 aa15.16■□□□□ 0.02
TMEM40-204ENST00000435218 ATG2BQ96BY7 2078 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 CAPN8A6NHC0 703 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 SMIM23A6NLE4 172 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 SLC7A4O43246 635 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 PRKCGP05129 697 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 INHBAP08476 426 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 CNTFP26441 200 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 ARNTP27540 789 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 OAS2P29728 719 aaKnown RBP15.15■□□□□ 0.02
TMEM40-204ENST00000435218 SERPINB9P50453 376 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 ZNF140P52738 457 aaPredicted RBP15.15■□□□□ 0.02
TMEM40-204ENST00000435218 POLR2LP62875 67 aaKnown RBP15.15■□□□□ 0.02
TMEM40-204ENST00000435218 PFKPQ01813 784 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 PTCRAQ6ISU1 281 aaPredicted RBP15.15■□□□□ 0.02
TMEM40-204ENST00000435218 SERPINA13PQ6UXR4 307 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 GLT6D1Q7Z4J2 308 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 SFTPA1Q8IWL2 248 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 CTAGE3PQ8IX95 158 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 UNC5BQ8IZJ1 945 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 NDUFAF2Q8N183 169 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 TTC30BQ8N4P2 665 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 MDGA1Q8NFP4 955 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 MCCC1Q96RQ3 725 aaPredicted RBP15.15■□□□□ 0.02
TMEM40-204ENST00000435218 CENPHQ9H3R5 247 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 NLE1Q9NVX2 485 aaPredicted RBP15.15■□□□□ 0.02
TMEM40-204ENST00000435218 DKK3Q9UBP4 350 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 CTNNAL1Q9UBT7 734 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 IL36AQ9UHA7 158 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 ACTL7BQ9Y614 415 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 F5P12259 2224 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 PLXNA2O75051 1894 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 PLXNB3Q9ULL4 1909 aa15.15■□□□□ 0.02
TMEM40-204ENST00000435218 C2orf81A6NN90 581 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 BNIP3LO60238 219 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 LEFTY1O75610 366 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 FAM155BO75949 473 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 UGT2B4P06133 528 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 ERVK-10P10266 1014 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 LPOP22079 712 aaPredicted RBP15.14■□□□□ 0.01
TMEM40-204ENST00000435218 SLC8A1P32418 973 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 HMGCLP35914 325 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 SOX9P48436 509 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 ELAVL3Q14576 367 aaKnown RBP15.14■□□□□ 0.01
TMEM40-204ENST00000435218 C9orf64Q5T6V5 341 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 TEDDM1Q5T9Z0 273 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 RASSF3Q86WH2 238 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 ZSWIM9Q86XI8 627 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 TMIEQ8NEW7 156 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 GABPB2Q8TAK5 448 aaPredicted RBP15.14■□□□□ 0.01
TMEM40-204ENST00000435218 PPM1EQ8WY54 764 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 ZBTB9Q96C00 473 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 SCRN2Q96FV2 425 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 SGSM3Q96HU1 749 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 FBRSL1Q9HCM7 1045 aaKnown RBP15.14■□□□□ 0.01
TMEM40-204ENST00000435218 SLC2A4RGQ9NR83 387 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 C20orf96Q9NUD7 363 aaPredicted RBP15.14■□□□□ 0.01
TMEM40-204ENST00000435218 SENP1Q9P0U3 644 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 SLC2A6Q9UGQ3 507 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 SUN2Q9UH99 717 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 ZNF711Q9Y462 761 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 ARL5AQ9Y689 179 aa15.14■□□□□ 0.01
TMEM40-204ENST00000435218 IQANK1A0A1B0GTG1 560 aa15.13■□□□□ 0.01
TMEM40-204ENST00000435218 LOC730098B7Z3J9 87 aa15.13■□□□□ 0.01
TMEM40-204ENST00000435218 H7C0S8 307 aa15.13■□□□□ 0.01
TMEM40-204ENST00000435218 K7EQS6 105 aa15.13■□□□□ 0.01
TMEM40-204ENST00000435218 RPP40O75818 363 aaKnown RBP15.13■□□□□ 0.01
TMEM40-204ENST00000435218 PIAS1O75925 651 aa15.13■□□□□ 0.01
TMEM40-204ENST00000435218 VAPBO95292 243 aa15.13■□□□□ 0.01
TMEM40-204ENST00000435218 PRNPP04156 253 aa15.13■□□□□ 0.01
TMEM40-204ENST00000435218 CTSLP07711 333 aa15.13■□□□□ 0.01
TMEM40-204ENST00000435218 PIRTP0C851 137 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms