RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 LRRC49Q8IUZ0 686 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 PSMG2Q969U7 264 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 TSPAN17Q96FV3 270 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 SERPINB11Q96P15 392 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 GSTO2Q9H4Y5 243 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 FBRSL1Q9HCM7 1045 aaKnown RBP11.86□□□□□ -0.51
CD44-209ENST00000433892 ATP13A1Q9HD20 1204 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 ABI2Q9NYB9 513 aaPredicted RBP11.86□□□□□ -0.51
CD44-209ENST00000433892 MARCH4Q9P2E8 410 aaPredicted RBP11.86□□□□□ -0.51
CD44-209ENST00000433892 CRYL1Q9Y2S2 319 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 KCTD3Q9Y597 815 aa11.86□□□□□ -0.51
CD44-209ENST00000433892 ZNF623O75123 536 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 GJB3O75712 270 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 CSPG5O95196 566 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 CELF2O95319 508 aaKnown RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 MMP2P08253 660 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 AKR1A1P14550 325 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 ATP6V1B1P15313 513 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 RGS2P41220 211 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 MYBPC1Q00872 1141 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 YWHAHQ04917 246 aaPredicted RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 MGAT3Q09327 533 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 PSMD5Q16401 504 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 NRF1Q16656 503 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 DDR2Q16832 855 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 CYP2R1Q6VVX0 501 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 CYHR1Q6ZMK1 362 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 C2orf69Q8N8R5 385 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 TRPV1Q8NER1 839 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 OR52K2Q8NGK3 314 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 EXT2Q93063 718 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 EME1Q96AY2 570 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 NMD3Q96D46 503 aaKnown RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 ADAM2Q99965 735 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 ZCWPW1Q9H0M4 648 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SUCOQ9UBS9 1254 aaKnown RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 AP4S1Q9Y587 144 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 COMMD3-BMI1R4GMX3 469 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 A0A0U1RQF3 1178 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SMIM31A0A1B0GVY4 71 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 DUSP11O75319 330 aaKnown RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 S1PR4O95977 384 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SLC4A1P02730 911 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SNRPB2P08579 225 aaKnown RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 ETFBP38117 255 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 GPR15P49685 360 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 CDH13P55290 713 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 PRAMEP78395 509 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 MAPRE2Q15555 327 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 TAF1CQ15572 869 aaPredicted RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 SLC14A2Q15849 920 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SIRPB2Q5JXA9 342 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 ISCA2Q86U28 154 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SLC22A9Q8IVM8 553 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 UMODL1-AS1Q8N2C9 162 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 RYBPQ8N488 228 aaPredicted RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 GABPB2Q8TAK5 448 aaPredicted RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 LRTOMTQ8WZ04 291 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 LPGAT1Q92604 370 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SUSD3Q96L08 255 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 C1orf74Q96LT6 269 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 PRICKLE1Q96MT3 831 aaPredicted RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 PRPF18Q99633 342 aaKnown RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 SLC39A3Q9BRY0 314 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SP110Q9HB58 689 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 SPAG4Q9NPE6 437 aa11.85□□□□□ -0.51
CD44-209ENST00000433892 UXTQ9UBK9 157 aaPredicted RBP11.85□□□□□ -0.51
CD44-209ENST00000433892 A0A1B0GVG6 124 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 MROH6A6NGR9 719 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 WASH4PA8MWX3 477 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 MRASO14807 208 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 TRIM24O15164 1050 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 TRPA1O75762 1119 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 TBX18O95935 607 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 CAPNS1P04632 268 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 ZNF26P17031 533 aaPredicted RBP11.84□□□□□ -0.51
CD44-209ENST00000433892 IMPDH1P20839 514 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 FGFR3P22607 806 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 RPL5P46777 297 aaKnown RBP11.84□□□□□ -0.51
CD44-209ENST00000433892 PSMD8P48556 350 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 PTPRCAPQ14761 206 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 SLC5A9Q2M3M2 681 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 MGAT5BQ3V5L5 792 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 MS4A13Q5J8X5 152 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 ZNF678Q5SXM1 525 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 METTL25Q8N6Q8 603 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 GPR152Q8TDT2 470 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 PTERQ96BW5 349 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 C3orf30Q96M34 536 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 RANBP9Q96S59 729 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 ZYG11BQ9C0D3 744 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 VCX3AQ9NNX9 186 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 VPS45Q9NRW7 570 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 RGS18Q9NS28 235 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 TLR6Q9Y2C9 796 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.84□□□□□ -0.51
CD44-209ENST00000433892 SLC4A7Q9Y6M7 1214 aa11.84□□□□□ -0.51
CD44-209ENST00000433892 PTPRDP23468 1912 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms