RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PRDM8Q9NQV8 689 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RGS18Q9NS28 235 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SCHIP1Q9P0W5 487 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 LRRC42Q9Y546 428 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PSMG1O95456 288 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 EPB42P16452 691 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CYP2A7P20853 494 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PSMD8P48556 350 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CASP4P49662 377 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ITKQ08881 620 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RBBP4Q09028 425 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 C1DQ13901 141 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 TAF1AQ15573 450 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ZYG11AQ6WRX3 759 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 LRRC8DQ7L1W4 858 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CYP4Z1Q86W10 505 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ASZ1Q8WWH4 475 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MYDGFQ969H8 173 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 DCUN1D1Q96GG9 259 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PLEKHG4BQ96PX9 1271 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ELAC2Q9BQ52 826 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ZSCAN5AQ9BUG6 496 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MRPS26Q9BYN8 205 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 DERL2Q9GZP9 239 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RIBC2Q9H4K1 309 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PI4KAP42356 2102 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 LCTP09848 1927 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 NLRC5Q86WI3 1866 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 TYROBPO43914 113 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SH3BP5O60239 455 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MAN1A2O60476 641 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 BCAS2O75934 225 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ECHS1P30084 290 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 NSG1P42857 185 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 OR1G1P47890 313 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ALDH18A1P54886 795 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 NCALDP61601 193 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RUNX1T1Q06455 604 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 NAIF1Q69YI7 327 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PKN3Q6P5Z2 889 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 GSPT2Q8IYD1 628 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RXFP2Q8WXD0 754 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 C19orf60Q96EN9 201 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 TAAR1Q96RJ0 339 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 LRRC4CQ9HCJ2 640 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MOCS1Q9NZB8 636 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CALML5Q9NZT1 146 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CFL2Q9Y281 166 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 DNAJC13O75165 2243 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 WDR91A4D1P6 747 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 H3BUI4 141 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RGS20O76081 388 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ADH1CP00326 375 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SMIM10L2AP0DMW4 78 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SMIM10L2BP0DMW5 78 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 FASP25445 335 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ALDH9A1P49189 494 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 STC1P52823 247 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SNRPD1P62314 119 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 TCEA2Q15560 299 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RAB41Q5JT25 222 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RASIP1Q5U651 963 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF470Q6ECI4 717 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RAPH1Q70E73 1250 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 DNAAF5Q86Y56 855 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 GALNT15Q8N3T1 639 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CPSF7Q8N684 471 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 OTUD5Q96G74 571 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 WDCPQ9H6R7 721 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PAIP2BQ9ULR5 123 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 JAG2Q9Y219 1238 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SPG11Q96JI7 2443 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 FTH1P02794 183 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PTPN1P18031 435 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 GSTM3P21266 225 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PTPN3P26045 913 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MAP4P27816 1152 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MRPL28Q13084 256 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SEMA3AQ14563 771 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 GGTA1PQ4G0N0 100 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PTPN20Q4JDL3 420 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 STRA8Q7Z7C7 330 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 DHFR2Q86XF0 187 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 XYLT1Q86Y38 959 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CLP1Q92989 425 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ATP6V1E2Q96A05 226 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CSNK1G1Q9HCP0 422 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RNF181Q9P0P0 153 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 AFF4Q9UHB7 1163 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 B3GNT3Q9Y2A9 372 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SLC30A1Q9Y6M5 507 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SEMA3DO95025 777 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 C8BP07358 591 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RAD23BP54727 409 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 HSF5Q4G112 596 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SPIN4Q56A73 249 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 N4BP2L1Q5TBK1 243 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PM20D1Q6GTS8 502 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SLC2A14Q8TDB8 520 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RAB7BQ96AH8 199 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms