RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CLCN5P51795 746 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 FOXK2Q01167 660 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 SEPT6Q14141 434 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 AGBL2Q5U5Z8 902 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 NAIF1Q69YI7 327 aaPredicted RBP18.33■□□□□ 0.52
HMGN1-206ENST00000431390 TRMT10BQ6PF06 316 aaKnown RBP18.33■□□□□ 0.52
HMGN1-206ENST00000431390 CAMK1DQ8IU85 385 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 PDCD6IPQ8WUM4 868 aaKnown RBP18.33■□□□□ 0.52
HMGN1-206ENST00000431390 VOPP1Q96AW1 172 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 ZBTB9Q96C00 473 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 MFSD3Q96ES6 412 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 CERS2Q96G23 380 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 RIMKLBQ9ULI2 386 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 PCDHB9Q9Y5E1 797 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 TLDC2A0PJX2 215 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 MROH6A6NGR9 719 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 POC1B-GALNT4F8VUJ3 575 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 H3BQF6 201 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 PAMP19021 973 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 NMBRP28336 390 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 GCAP28676 217 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 GKP32189 559 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 SLCO1A2P46721 670 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 NAB1Q13506 487 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 QPCTQ16769 361 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 FNDC3BQ53EP0 1204 aaKnown RBP18.32■□□□□ 0.52
HMGN1-206ENST00000431390 TSTD2Q5T7W7 516 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 CES3Q6UWW8 571 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 SLC44A3Q8N4M1 653 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 PIH1D2Q8WWB5 315 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 CDKL2Q92772 493 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 ARL8AQ96BM9 186 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 ECHDC3Q96DC8 303 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 LRIG1Q96JA1 1093 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 HEPHQ9BQS7 1158 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 DHRS4Q9BTZ2 278 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 SUV39H2Q9H5I1 410 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 ZDHHC6Q9H6R6 413 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 TREX1Q9NSU2 369 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 EURLQ9NYK6 297 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.32■□□□□ 0.525e-15■■■■□ 19.6
HMGN1-206ENST00000431390 HACD3Q9P035 362 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 THAP10Q9P2Z0 257 aaPredicted RBP18.32■□□□□ 0.52
HMGN1-206ENST00000431390 LGALS13Q9UHV8 139 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 STARD13Q9Y3M8 1113 aa18.32■□□□□ 0.52
HMGN1-206ENST00000431390 RIF1Q5UIP0 2472 aaKnown RBP18.32■□□□□ 0.52
HMGN1-206ENST00000431390 DMDP11532 3685 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 SMIM23A6NLE4 172 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 RGS16O15492 202 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-206ENST00000431390 LDB2O43679 373 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 PI15O43692 258 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 BNIP3LO60238 219 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 CRTAMO95727 393 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 EPHB1P54762 984 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 MGAT5Q09328 741 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 ZNF234Q14588 700 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 EFTUD2Q15029 972 aaKnown RBP eCLIP18.31■□□□□ 0.522e-22■■■■■ 48.1
HMGN1-206ENST00000431390 PDPK2PQ6A1A2 396 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 LRRC6Q86X45 466 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 BLOC1S5Q8TDH9 187 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 SLC44A1Q8WWI5 657 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 PTPRN2Q92932 1015 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 ATP6V1G3Q96LB4 118 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 ZNF778Q96MU6 729 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 SRPK1Q96SB4 655 aaKnown RBP18.31■□□□□ 0.52
HMGN1-206ENST00000431390 PAFAH2Q99487 392 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 P2RY13Q9BPV8 354 aa18.31■□□□□ 0.52
HMGN1-206ENST00000431390 STMN4Q9H169 189 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-206ENST00000431390 C8orf33Q9H7E9 229 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-206ENST00000431390 PSMC3IPQ9P2W1 217 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-206ENST00000431390 EDDM13A0A1B0GTR0 161 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 HMGB1P1B2RPK0 211 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 NPC1O15118 1278 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 CTHP32929 405 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 MSH2P43246 934 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 TNFRSF4P43489 277 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 SOX9P48436 509 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 GALK1P51570 392 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 TAF1AQ15573 450 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 HNRNPA1L2Q32P51 320 aaKnown RBP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 TTMPQ5BVD1 217 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 KIAA0930Q6ICG6 404 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 ADGRD1Q6QNK2 874 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 MARK2Q7KZI7 788 aaKnown RBP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 RALGPS2Q86X27 583 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 CHST14Q8NCH0 376 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 OSBPL1AQ9BXW6 950 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 TMEM245Q9H330 911 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 TRABDQ9H4I3 376 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 MAGEE1Q9HCI5 957 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 SMYD2Q9NRG4 433 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 WASF2Q9Y6W5 498 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 SPECC1L-ADORA2AF8WAN1 911 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 HNRNPLP14866 589 aaKnown RBP eCLIP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 AOC1P19801 751 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 ATP5DP30049 168 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 PDE1BQ01064 536 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 ACVR1Q04771 509 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 TNFAIP8L3Q5GJ75 292 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms