RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 XRCC4Q13426 336 aa17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 KYAT3Q6YP21 454 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 GCNT7Q6ZNI0 430 aa17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 USP45Q70EL2 814 aa17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 DPPA4Q7L190 304 aa17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 PIP4P1Q86T03 277 aa17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 CNTD1Q8N815 330 aa17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 ARRDC2Q8TBH0 407 aa17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 KLF6Q99612 283 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 CAPN6Q9Y6Q1 641 aa17.47■□□□□ 0.39
CTDSP1-203ENST00000431127 A0A1B0GTQ1 180 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 KCNK3O14649 394 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 RAD51BO15315 384 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 LZTS3O60299 673 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 PCDHGA12O60330 932 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 PRKCGP05129 697 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 PTMAP06454 111 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 ELFN1P0C7U0 828 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 PYGMP11217 842 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 CYP2A6P11509 494 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 CEACAM1P13688 526 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 RPL26P61254 145 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 NIPAL4Q0D2K0 466 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 LRRC14Q15048 493 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 AGERQ15109 404 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 TEX44Q53QW1 395 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 Q6ZSR6 202 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 PTAR1Q7Z6K3 402 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 ZC3H18Q86VM9 953 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 SPATS2Q86XZ4 545 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 OR13H1Q8NG92 308 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 SCRN2Q96FV2 425 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 HES6Q96HZ4 224 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 BMFQ96LC9 184 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 AGAP3Q96P47 875 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 ALS2CR12Q96Q35 445 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 VAT1Q99536 393 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 FERMT1Q9BQL6 677 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 RPL26L1Q9UNX3 145 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 PPIL1Q9Y3C6 166 aa17.46■□□□□ 0.39
CTDSP1-203ENST00000431127 ASCC3Q8N3C0 2202 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 GOLGA6L9A6NEM1 432 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 POM121BA6NF01 834 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 DDX3YO15523 660 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 FLRT2O43155 660 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 FZD6O60353 706 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 ZNF189O75820 626 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 KCNK5O95279 499 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 VIPR1P32241 457 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 RXRGP48443 463 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 EPHB1P54762 984 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 RALGDSQ12967 914 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 NOMO1Q15155 1222 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 INAVAQ3KP66 663 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 LIPIQ6XZB0 460 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 DBX2Q6ZNG2 339 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 PIH1D2Q8WWB5 315 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 HAUS1Q96CS2 278 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 IFT43Q96FT9 208 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 QKIQ96PU8 341 aaKnown RBP eCLIP17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 MCCC1Q96RQ3 725 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 TDRD1Q9BXT4 1180 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 SLC25A51Q9H1U9 297 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 LZTFL1Q9NQ48 299 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 KCTD5Q9NXV2 234 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 B4GALT6Q9UBX8 382 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 DNPEPQ9ULA0 475 aa17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 PACSIN2Q9UNF0 486 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 CNOT1A5YKK6 2376 aaKnown RBP17.45■□□□□ 0.38
CTDSP1-203ENST00000431127 PTPN3P26045 913 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 CD86P42081 329 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 NOVA1P51513 510 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 PFN3P60673 137 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 YPEL5P62699 121 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 SKOR1P84550 965 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 ARHGEF7Q14155 803 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 SLC14A2Q15849 920 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 B4GALNT4Q76KP1 1039 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 NAXDQ8IW45 347 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 TTC13Q8NBP0 860 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 TP53I13Q8NBR0 393 aaPredicted RBP17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 HTR3CQ8WXA8 447 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 IMP4Q96G21 291 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 TEKT5Q96M29 485 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 ADGRE3Q9BY15 652 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 PCDH9Q9HC56 1237 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 GPR27Q9NS67 375 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 TRHDEQ9UKU6 1024 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 CHKBQ9Y259 395 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 DOCK9Q9BZ29 2069 aa17.44■□□□□ 0.38
CTDSP1-203ENST00000431127 H7C0C1 242 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 PSMD11O00231 422 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 SH3BP5O60239 455 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 RECQL5O94762 991 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 HEXIM1O94992 359 aaKnown RBP17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 MMP2P08253 660 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 PDHA1P08559 390 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 GRK6P43250 576 aa17.43■□□□□ 0.38
CTDSP1-203ENST00000431127 ATP5OP48047 213 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms