RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 TMEM259Q4ZIN3 620 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 BRAT1Q6PJG6 821 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 ZNF843Q8N446 348 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTCD1-204ENST00000430982 TEX26Q8N6G2 289 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 EXD1Q8NHP7 514 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 HCAR2Q8TDS4 363 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 CXorf40AQ8TE69 158 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 RHBDD1Q8TEB9 315 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 MAML1Q92585 1016 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 HDAC11Q96DB2 347 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 NSMCE3Q96MG7 304 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 LGMNQ99538 433 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 SLC17A9Q9BYT1 436 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 NOD2Q9HC29 1040 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 RBM22Q9NW64 420 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTCD1-204ENST00000430982 TTLL3Q9Y4R7 772 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 ADGRG1Q9Y653 693 aa15.32■□□□□ 0.04
PTCD1-204ENST00000430982 MGAQ8IWI9 3026 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 A0A1W2PR77 199 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 IGLON5A6NGN9 336 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 KCNK3O14649 394 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 PPP1R12AO14974 1030 aaPredicted RBP15.31■□□□□ 0.04
PTCD1-204ENST00000430982 AREL1O15033 823 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 VILLO15195 856 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 SPINT1O43278 529 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 CST8O60676 142 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 MMP20O60882 483 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 CCNB1P14635 433 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 CR2P20023 1033 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 HNRNPA2B1P22626 353 aaKnown RBP15.31■□□□□ 0.04
PTCD1-204ENST00000430982 CTNNA2P26232 953 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 ITPKBP27987 946 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 CTNNA1P35221 906 aaKnown RBP15.31■□□□□ 0.04
PTCD1-204ENST00000430982 SUOXP51687 545 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 PPIDQ08752 370 aaKnown RBP15.31■□□□□ 0.04
PTCD1-204ENST00000430982 ELP6Q0PNE2 266 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 AP1B1Q10567 949 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 SGCGQ13326 291 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 TAZQ16635 292 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 UGP2Q16851 508 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 TFDP3Q5H9I0 405 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 ERAP2Q6P179 960 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 PEX26Q7Z412 305 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 ZSWIM9Q86XI8 627 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 LRRC8AQ8IWT6 810 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 SYCE1Q8N0S2 351 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 LRRC57Q8N9N7 239 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 PDCD6IPQ8WUM4 868 aaKnown RBP15.31■□□□□ 0.04
PTCD1-204ENST00000430982 SEMA3CQ99985 751 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 WRAP53Q9BUR4 548 aaKnown RBP15.31■□□□□ 0.04
PTCD1-204ENST00000430982 PCDH12Q9NPG4 1184 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 HAUS2Q9NVX0 235 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 SEPT10Q9P0V9 454 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 AMFRQ9UKV5 643 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 PCDHGC4Q9Y5F7 938 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 TMEM131Q92545 1883 aa15.31■□□□□ 0.04
PTCD1-204ENST00000430982 hCG_1818297A0A087WSY0 165 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 CCDC66A2RUB6 948 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 KCNK1O00180 336 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 NRDCO43847 1150 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 PCDHGA12O60330 932 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 PAK4O96013 591 aaPredicted RBP15.3■□□□□ 0.04
PTCD1-204ENST00000430982 JCHAINP01591 159 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 HLA-DQB2P05538 268 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 TGM2P21980 687 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 EIF2S3P41091 472 aaKnown RBP15.3■□□□□ 0.04
PTCD1-204ENST00000430982 CTSKP43235 329 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 GRK6P43250 576 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 KNTC1P50748 2209 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 CLDN2P57739 230 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 SEMG2Q02383 582 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 DSC2Q02487 901 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 FGL2Q14314 439 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 RALGPS1Q5JS13 557 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 PCSK4Q6UW60 755 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 B4GALNT4Q76KP1 1039 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 ZSCAN30Q86W11 494 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 TMPRSS12Q86WS5 348 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 MFSD2AQ8NA29 543 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 FATE1Q969F0 183 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 HAUS1Q96CS2 278 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 DCBLD2Q96PD2 775 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 HEMGNQ9BXL5 484 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 TSGA10Q9BZW7 698 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 POLR1EQ9GZS1 481 aaKnown RBP15.3■□□□□ 0.04
PTCD1-204ENST00000430982 SAE1Q9UBE0 346 aaPredicted RBP15.3■□□□□ 0.04
PTCD1-204ENST00000430982 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
PTCD1-204ENST00000430982 TLR4O00206 839 aa15.29■□□□□ 0.04
PTCD1-204ENST00000430982 TRAFD1O14545 582 aaPredicted RBP15.29■□□□□ 0.04
PTCD1-204ENST00000430982 RIOK3O14730 519 aaKnown RBP15.29■□□□□ 0.04
PTCD1-204ENST00000430982 TLX3O43711 291 aaPredicted RBP15.29■□□□□ 0.04
PTCD1-204ENST00000430982 SOCS5O75159 536 aa15.29■□□□□ 0.04
PTCD1-204ENST00000430982 FTCDO95954 541 aa15.29■□□□□ 0.04
PTCD1-204ENST00000430982 CPP00450 1065 aa15.29■□□□□ 0.04
PTCD1-204ENST00000430982 PECAM1P16284 738 aaPredicted RBP15.29■□□□□ 0.04
PTCD1-204ENST00000430982 NR2C2P49116 596 aa15.29■□□□□ 0.04
PTCD1-204ENST00000430982 RWDD2BP57060 319 aa15.29■□□□□ 0.04
PTCD1-204ENST00000430982 POLR2LP62875 67 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms