RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SDK2Q58EX2 2172 aa11.85□□□□□ -0.51
HDAC4-202ENST00000430200 A0A1W2PQJ5 194 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 NPIPB15A6NHN6 443 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-202ENST00000430200 EIF3CLB5ME19 914 aaKnown RBP11.84□□□□□ -0.51
HDAC4-202ENST00000430200 USP12O75317 370 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 RNF8O76064 485 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 RECQL5O94762 991 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-202ENST00000430200 SERPINA4P29622 427 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 ABCG1P45844 678 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 HCAR3P49019 387 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 ARSEP51690 589 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 HK3P52790 923 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 YPEL5P62699 121 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 RAD51Q06609 339 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 LBRQ14739 615 aaKnown RBP11.84□□□□□ -0.51
HDAC4-202ENST00000430200 ISXQ2M1V0 245 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 FILIP1LQ4L180 1135 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 ATP13A4Q4VNC1 1196 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 TMCO4Q5TGY1 634 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 PCSK4Q6UW60 755 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 RFLNAQ6ZTI6 216 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 TSPAN33Q86UF1 283 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 HID1Q8IV36 788 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 PSTKQ8IV42 348 aaKnown RBP11.84□□□□□ -0.51
HDAC4-202ENST00000430200 NIPA2Q8N8Q9 360 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 CCL4L1Q8NHW4 92 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 EIF3CQ99613 913 aaKnown RBP11.84□□□□□ -0.51
HDAC4-202ENST00000430200 MGME1Q9BQP7 344 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 APOOQ9BUR5 198 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 DUSP23Q9BVJ7 150 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 NUP85Q9BW27 656 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 PRORYQ9H606 182 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 ATP13A3Q9H7F0 1226 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 SIRPGQ9P1W8 387 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 SPASTQ9UBP0 616 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 SALL4Q9UJQ4 1053 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 ANAPC7Q9UJX3 599 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 PCDHGC4Q9Y5F7 938 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 ST14Q9Y5Y6 855 aa11.84□□□□□ -0.51
HDAC4-202ENST00000430200 ZNF462Q96JM2 2506 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 NEMP2A6NFY4 417 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 H3BRJ5 948 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 TPP1O14773 563 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 DAPK3O43293 454 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 HTRA2O43464 458 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-202ENST00000430200 C1QL1O75973 258 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 FUCA1P04066 466 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 PRB1P04280 392 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 CYP1A2P05177 515 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 MYBL1P10243 752 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 XPAP23025 273 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-202ENST00000430200 SCNN1BP51168 640 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 TAS2R40P59535 323 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 AP1S1P61966 158 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 E2F1Q01094 437 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 PPARDQ03181 441 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 TLE3Q04726 772 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 BCL2L1Q07817 233 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 CCDC173Q0VFZ6 552 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 MTM1Q13496 603 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 NR0B2Q15466 257 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 C3orf38Q5JPI3 329 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 FAXCQ5TGI0 409 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 NCBP2-AS2Q69YL0 99 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 PPP1R2P3Q6NXS1 205 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 ENPP7Q6UWV6 458 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 SPACA3Q8IXA5 215 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 HCAR2Q8TDS4 363 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 CCDC74AQ96AQ1 378 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 NAF1Q96HR8 494 aaKnown RBP11.83□□□□□ -0.52
HDAC4-202ENST00000430200 TBATAQ96M53 351 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 COQ10AQ96MF6 247 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 DEPDC7Q96QD5 511 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 IL12RB2Q99665 862 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 CCDC3Q9BQI4 270 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.83□□□□□ -0.52
HDAC4-202ENST00000430200 NOD2Q9HC29 1040 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 IFNKQ9P0W0 207 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 SATB2Q9UPW6 733 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 AHCTF1Q8WYP5 2266 aa11.83□□□□□ -0.52
HDAC4-202ENST00000430200 SETXQ7Z333 2677 aaKnown RBP11.82□□□□□ -0.52
HDAC4-202ENST00000430200 A0A1W2PQM1 296 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 SOD1P00441 154 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 CPP00450 1065 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 SERPING1P05155 500 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 PDHA1P08559 390 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 ALPIP09923 528 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 ELFN1P0C7U0 828 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 GJC1P36383 396 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 SUOXP51687 545 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 KIAA1024LP59773 190 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 SRP54P61011 504 aaKnown RBP11.82□□□□□ -0.52
HDAC4-202ENST00000430200 ZBED6P86452 979 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 DPYSL3Q14195 570 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 PTK2BQ14289 1009 aa11.82□□□□□ -0.52
HDAC4-202ENST00000430200 RFTN1Q14699 578 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-202ENST00000430200 HS1BP3Q53T59 392 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms