RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 JPH3Q8WXH2 748 aaPredicted RBP10.23□□□□□ -0.77
ATG4B-211ENST00000429899 PTPRN2Q92932 1015 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 TTC17Q96AE7 1141 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 TMA16Q96EY4 203 aaKnown RBP10.23□□□□□ -0.77
ATG4B-211ENST00000429899 PGAP3Q96FM1 320 aaPredicted RBP10.23□□□□□ -0.77
ATG4B-211ENST00000429899 TBCBQ99426 244 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 TUBB2BQ9BVA1 445 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 TRIM62Q9BVG3 475 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 DUSP23Q9BVJ7 150 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 DNAJC28Q9NX36 388 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 CLIC5Q9NZA1 410 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 PISDQ9UG56 409 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 SLCO3A1Q9UIG8 710 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 STAP1Q9ULZ2 295 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 NAALADL1Q9UQQ1 740 aa10.23□□□□□ -0.77
ATG4B-211ENST00000429899 ARHGEF17Q96PE2 2063 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 PRAMEF33A0A0G2JMD5 474 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 PDE2AO00408 941 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 RIOK3O14730 519 aaKnown RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 MUSKO15146 869 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 SLC31A1O15431 190 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 PRAMEF10O60809 474 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 ADH1BP00325 375 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 JMJD7P0C870 316 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 VAV1P15498 845 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 ITIH1P19827 911 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 MZF1P28698 734 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 PSEN1P49768 467 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 RWDD2BP57060 319 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 CLDN2P57739 230 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 ST8SIA6P61647 398 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 ATP11AP98196 1134 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 EIF4EBP2Q13542 120 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 TRIP4Q15650 581 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 CDO1Q16878 200 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 DEFB133Q30KQ1 61 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 SETMARQ53H47 684 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 BSPRYQ5W0U4 402 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 RFWD3Q6PCD5 774 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 RSRC2Q7L4I2 434 aaKnown RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 TAC4Q86UU9 113 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 DTX1Q86Y01 620 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 ARHGAP18Q8N392 663 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 LRRN4CLQ8ND94 238 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 ZNF548Q8NEK5 533 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 PLD4Q96BZ4 506 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 POM121Q96HA1 1249 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 PBKQ96KB5 322 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 NCAPGQ9BPX3 1015 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 FOXP3Q9BZS1 431 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 RRN3Q9NYV6 651 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 SMARCAL1Q9NZC9 954 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 FOXJ2Q9P0K8 574 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 KLF15Q9UIH9 416 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 SARDHQ9UL12 918 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 TTC7AQ9ULT0 858 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-211ENST00000429899 ERVW-1Q9UQF0 538 aa10.22□□□□□ -0.77
ATG4B-211ENST00000429899 EDDM13A0A1B0GTR0 161 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 GOLGA6L7A0A1B0GV03 622 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 TARSL2A2RTX5 802 aaKnown RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 C3orf70A6NLC5 250 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 NTN3O00634 580 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 NVLO15381 856 aaKnown RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 IRAK2O43187 625 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 TBL1XO60907 577 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 RNF8O76064 485 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 TRUB2O95900 331 aaKnown RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 KRT1P04264 644 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 PYGMP11217 842 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 PTPN7P35236 360 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 GJC1P36383 396 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 NUDT1P36639 197 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 ETV5P41161 510 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 NUMBP49757 651 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 ARSEP51690 589 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 TAS2R38P59533 333 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 CKAP4Q07065 602 aaKnown RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 KLRB1Q12918 225 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 TAZQ16635 292 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 DCAF6Q58WW2 860 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 ADGRF1Q5T601 910 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 AGBL4Q5VU57 503 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 AADACL2Q6P093 401 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 HEATR4Q86WZ0 1026 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 EXD1Q8NHP7 514 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 FAM71BQ8TC56 605 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 ACTRT1Q8TDG2 376 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 TEKT4Q8WW24 435 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 EDEM1Q92611 657 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 MS4A14Q96JA4 679 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 CAPZA3Q96KX2 299 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 CDK5RAP1Q96SZ6 601 aaKnown RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 CCDC3Q9BQI4 270 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 HERPUD2Q9BSE4 406 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 SNRNP25Q9BV90 132 aaKnown RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 PREBQ9HCU5 417 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 ABCC13Q9NSE7 274 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 PIGVQ9NUD9 493 aa10.21□□□□□ -0.77
ATG4B-211ENST00000429899 CUEDC1Q9NWM3 386 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-211ENST00000429899 STOML2Q9UJZ1 356 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms