RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TTC7BQ86TV6 843 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMPRSS6Q8IU80 811 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ANKMY2Q8IV38 441 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZBED8Q8IZ13 594 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 MPP5Q8N3R9 675 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPEM1Q8N4L4 309 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 AADATQ8N5Z0 425 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 FBXO36Q8NEA4 188 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 HCAR2Q8TDS4 363 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 PIH1D2Q8WWB5 315 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 VOPP1Q96AW1 172 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 CLDN23Q96B33 292 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ARRDC3Q96B67 414 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 SIPA1Q96FS4 1042 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 SMIM14Q96QK8 99 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 OMDQ99983 421 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 GPR63Q9BZJ6 419 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 PHACTR1Q9C0D0 580 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 IL22Q9GZX6 179 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 MKRN2Q9H000 416 aaKnown RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 TSPYL1Q9H0U9 437 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 PABPC3Q9H361 631 aaKnown RBP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 PCDH12Q9NPG4 1184 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 HACD3Q9P035 362 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 B4GALT6Q9UBX8 382 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 RAB21Q9UL25 225 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 PHTF1Q9UMS5 762 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ITM2BQ9Y287 266 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZNF711Q9Y462 761 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPO11Q9Y5K1 396 aa7.95□□□□□ -1.14
HMGA1P4-201ENST00000428643 MYOFQ9NZM1 2061 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 F5P12259 2224 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 CHD5Q8TDI0 1954 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 A0A0J9YYE9 177 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 A0A1W2PP55 124 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 HEATR9A2RTY3 570 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 A8MX80 341 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 ANKRD66B4E2M5 251 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 EIF3HO15372 352 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 APBB3O95704 486 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 CRTAMO95727 393 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 TRBC1P01850 177 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 CYP2A6P11509 494 aaPredicted RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 ADRB3P13945 408 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 TIMP2P16035 220 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 GABRG2P18507 467 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 PGAM1P18669 254 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 VIPR1P32241 457 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 HNF1BP35680 557 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 NPY2RP49146 381 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 SUOXP51687 545 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZBTB16Q05516 673 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 CCDC15Q0P6D6 951 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 SFSWAPQ12872 951 aaKnown RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 MTAPQ13126 283 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 FZD5Q13467 585 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 LAMB3Q13751 1172 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 GAS6Q14393 721 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 SLMAPQ14BN4 828 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 BRD3Q15059 726 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 PTPRRQ15256 657 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 LRRC66Q68CR7 880 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 EMBQ6PCB8 327 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 CAPN12Q6ZSI9 719 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 DPPA4Q7L190 304 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 LYSMD3Q7Z3D4 306 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 TMC3Q7Z5M5 1100 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 FAM124AQ86V42 546 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 HDDC3Q8N4P3 179 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 AENQ8WTP8 325 aaKnown RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 PYROXD1Q8WU10 500 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPOCK2Q92563 424 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 PBXIP1Q96AQ6 731 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZNF669Q96BR6 464 aaPredicted RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 LRRC39Q96DD0 335 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 MRGPRX1Q96LB2 322 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 C9orf72Q96LT7 481 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 MCCC1Q96RQ3 725 aaPredicted RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 SRPK1Q96SB4 655 aaKnown RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 IER2Q9BTL4 223 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 WRAP53Q9BUR4 548 aaKnown RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 HDAC8Q9BY41 377 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 ARNT2Q9HBZ2 717 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 CD248Q9HCU0 757 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 ARGLU1Q9NWB6 273 aaPredicted RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 SPATA6Q9NWH7 488 aaPredicted RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 C2orf42Q9NWW7 574 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 FBXL12Q9NXK8 326 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 SERGEFQ9UGK8 458 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 ZC3H7BQ9UGR2 993 aaKnown RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 SCML1Q9UN30 329 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 NCKAP1Q9Y2A7 1128 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 FNDC3AQ9Y2H6 1198 aaKnown RBP7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 TCAF1Q9Y4C2 921 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 ARL5AQ9Y689 179 aa7.94□□□□□ -1.14
HMGA1P4-201ENST00000428643 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms