RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 SAMD4BQ5PRF9 694 aaKnown RBP7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ZNF678Q5SXM1 525 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 HECTD2Q5U5R9 776 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ISCA2Q86U28 154 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 LRRTM3Q86VH5 581 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 RNF148Q8N7C7 305 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ANKRD49Q8WVL7 239 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 LPGAT1Q92604 370 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 CASP10Q92851 521 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 CNBD2Q96M20 576 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 PAAF1Q9BRP4 392 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 COQ10BQ9H8M1 238 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 PRDM5Q9NQX1 630 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-204ENST00000428136 GTSE1Q9NYZ3 720 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ATXN10Q9UBB4 475 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ABCD2Q9UBJ2 740 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 TMCO1Q9UM00 188 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 VWA7Q9Y334 891 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 HS3ST4Q9Y661 456 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 PLXNA3P51805 1871 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 A0A1B0GVG6 124 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 TRIM64CA6NLI5 447 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 NRP2O60462 931 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 PMPCBO75439 489 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 S1PR4O95977 384 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 MYL3P08590 195 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 SPATA31D3P0C874 917 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ALDH3B2P48448 385 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 MGAT3Q09327 533 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ZNF280DQ6N043 979 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 HMBOX1Q6NT76 420 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 PPP4R4Q6NUP7 873 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 SPATA31D4Q6ZUB0 917 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 METTL23Q86XA0 190 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 FUNDC1Q8IVP5 155 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 PCDH20Q8N6Y1 951 aaKnown RBP7.9□□□□□ -1.14
LRCH3-204ENST00000428136 GPR150Q8NGU9 434 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 PEX13Q92968 403 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 SLC39A13Q96H72 371 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ASB2Q96Q27 587 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 POPDC3Q9HBV1 291 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 ADA2Q9NZK5 511 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 CEPT1Q9Y6K0 416 aa7.9□□□□□ -1.14
LRCH3-204ENST00000428136 LOC285095A0A1B0GVY8 99 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 TRIM64A6NGJ6 449 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 CCDC166P0CW27 439 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 ZNF23P17027 643 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 HOXB8P17481 243 aaPredicted RBP7.9□□□□□ -1.15
LRCH3-204ENST00000428136 TIAL1Q01085 375 aaKnown RBP eCLIP7.9□□□□□ -1.15
LRCH3-204ENST00000428136 BTG3Q14201 252 aaPredicted RBP7.9□□□□□ -1.15
LRCH3-204ENST00000428136 IHHQ14623 411 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 PPP1R3AQ16821 1122 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 AGKQ53H12 422 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 UNC50Q53HI1 259 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 MSANTD2Q6P1R3 559 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 ARHGAP22Q7Z5H3 698 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 C14orf80Q86SX3 495 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 PACRGLQ8N7B6 248 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 FAM156AQ8NDB6 213 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 OR10T2Q8NGX3 314 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 SCAMP5Q8TAC9 235 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 LENG1Q96BZ8 264 aaPredicted RBP7.9□□□□□ -1.15
LRCH3-204ENST00000428136 PTPN18Q99952 460 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 SIK2Q9H0K1 926 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 PCDHAC1Q9H158 963 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 POLR3BQ9NW08 1133 aaPredicted RBP7.9□□□□□ -1.15
LRCH3-204ENST00000428136 CROTQ9UKG9 612 aa7.9□□□□□ -1.15
LRCH3-204ENST00000428136 MTF2Q9Y483 593 aaPredicted RBP7.9□□□□□ -1.15
LRCH3-204ENST00000428136 IGLV3-10A0A075B6K4 115 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 ARHGAP10A1A4S6 786 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 TNPO2O14787 897 aaKnown RBP7.89□□□□□ -1.15
LRCH3-204ENST00000428136 PSMC3P17980 439 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 FDXRP22570 491 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 KCNC1P48547 511 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 PGFP49763 221 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 SCNN1GP51170 649 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 RENBPP51606 427 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 CDKN2DP55273 166 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 HERVK_113P63132 956 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 TUBA4AP68366 448 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 COQ5Q5HYK3 327 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 PHYKPLQ8IUZ5 450 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 HERC6Q8IVU3 1022 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 CLYBLQ8N0X4 340 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 LRTOMTQ8WZ04 291 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 EME1Q96AY2 570 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 NMD3Q96D46 503 aaKnown RBP7.89□□□□□ -1.15
LRCH3-204ENST00000428136 SGF29Q96ES7 293 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 MPP4Q96JB8 637 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 HOPXQ9BPY8 73 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-204ENST00000428136 ERVK-6Q9BXR3 956 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 ANKRD60Q9BZ19 345 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 TIMMDC1Q9NPL8 285 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 SLC52A3Q9NQ40 469 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 TMEM248Q9NWD8 314 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 HSFX1Q9UBD0 423 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 RIMKLBQ9ULI2 386 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 PHF24Q9UPV7 400 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 CASTOR2A6NHX0 329 aa7.89□□□□□ -1.15
LRCH3-204ENST00000428136 H3BNH8 94 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms