RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 RCN3Q96D15 328 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 CCDC126Q96EE4 140 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZHX1-C8orf76Q96EF9 292 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PDXPQ96GD0 296 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 OPALINQ96PE5 141 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 LENG8Q96PV6 779 aaPredicted RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACCSQ96QU6 501 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 BBS4Q96RK4 519 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NODALQ96S42 347 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 EBF4Q9BQW3 602 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 REEP2Q9BRK0 252 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZSCAN5AQ9BUG6 496 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FUNDC2Q9BWH2 189 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF518BQ9C0D4 1074 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NUAK2Q9H093 628 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM117Q9H0C3 514 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM245Q9H330 911 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 KAT8Q9H7Z6 458 aaKnown RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NOL11Q9H8H0 719 aaKnown RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 LRRC40Q9H9A6 602 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 COG4Q9H9E3 785 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 EML4Q9HC35 981 aaKnown RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 AGPAT4Q9NRZ5 378 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACOXLQ9NUZ1 547 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 NDFIP2Q9NV92 336 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 DMAC2Q9NW81 257 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 DCAF16Q9NXF7 216 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAP3K20Q9NYL2 800 aaKnown RBP5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 TAS2R14Q9NYV8 317 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 DTLQ9NZJ0 730 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FKBPLQ9UIM3 349 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 SERPINA10Q9UK55 444 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 FBXO5Q9UKT4 447 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 DNPEPQ9ULA0 475 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACSL5Q9ULC5 683 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCNH4Q9UQ05 1017 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PDE10AQ9Y233 779 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 IPPQ9Y573 584 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ASB4Q9Y574 426 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHGB2Q9Y5G2 931 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ST14Q9Y5Y6 855 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 TEX264Q9Y6I9 313 aa5.64□□□□□ -1.51
VTI1BP4-201ENST00000427516 ALS2Q96Q42 1657 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 hCG_1818297A0A087WSY0 165 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP3A7-CYP3A51PA0A087WV96 503 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 A0A1B0GVM2 712 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 AGAP5A6NIR3 686 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM159BA6NKW6 160 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 C12orf71A8MTZ7 269 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TCP10L2B9ZVM9 353 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 C9IYK1 514 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 E5RJQ4 531 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 E7ENX8 843 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 H3BM21 787 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 APOC4-APOC2K7ER74 178 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ENPP3O14638 875 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 PLD2O14939 933 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 NKRFO15226 690 aaKnown RBP eCLIP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 NDUFA2O43678 99 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TRIM13O60858 407 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 RFPL1O75677 317 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 OR5F1O95221 314 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 IFNA7P01567 189 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 HLA-DRAP01903 254 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 APOC2P02655 101 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TGFB3P10600 412 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 FGF3P11487 239 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MLNP12872 115 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 HSD17B1P14061 328 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 PHKG2P15735 406 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCNA6P17658 529 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 RAB3AP20336 220 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP3A5P20815 502 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ATP2B4P23634 1241 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP3A7P24462 503 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 LRPAP1P30533 357 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ETV6P41212 452 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ELK3P41970 407 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAGEA6P43360 314 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAGEA11P43364 429 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 HTR3AP46098 478 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 POLD2P49005 469 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 CLK1P49759 484 aaKnown RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 VEGFBP49765 207 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 PLA2G16P53816 162 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 EVA1CP58658 441 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MRPS5P82675 430 aaKnown RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 DAB2P98082 770 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 GALK2Q01415 458 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 FLI1Q01543 452 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 GK3PQ14409 553 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 DSC3Q14574 896 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 FASTKD3Q14CZ7 662 aaKnown RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 UGP2Q16851 508 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 SHROOM1Q2M3G4 852 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 INAVAQ3KP66 663 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 WDR44Q5JSH3 913 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ARMC4Q5T2S8 1044 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 CACHD1Q5VU97 1274 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 UBE2UQ5VVX9 321 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms