RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 TAS1R1Q7RTX1 841 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 PTERQ96BW5 349 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 CNDP1Q96KN2 507 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 WDR41Q9HAD4 459 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 MRM3Q9HC36 420 aaKnown RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 ZBTB26Q9HCK0 441 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 GMPR2Q9P2T1 348 aaKnown RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 SCOCQ9UIL1 159 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 VWA7Q9Y334 891 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 CCDC189A1A4V9 331 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 CAPN8A6NHC0 703 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 WASH4PA8MWX3 477 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 SIX3O95343 332 aaPredicted RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 LTA4HP09960 611 aaKnown RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 PRDX6P30041 224 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 LEPRP48357 1165 aaKnown RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 NME5P56597 212 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 ZNF549Q6P9A3 640 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 AAGABQ6PD74 315 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 BNC2Q6ZN30 1099 aaPredicted RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 CUZD1Q86UP6 607 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 OR7D4Q8NG98 312 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 PTCD2Q8WV60 388 aaKnown RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 ARNT2Q9HBZ2 717 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 VPS45Q9NRW7 570 aa11.67□□□□□ -0.54
FIRRE-201ENST00000427391 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.67□□□□□ -0.54
FIRRE-201ENST00000427391 A0A087X1B8 175 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 TXNDC9O14530 226 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 IPO13O94829 963 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 RPL17P18621 184 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 RGRP47804 291 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 NDST2P52849 883 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PFKPQ01813 784 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 FLOT2Q14254 428 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 NFE2Q16621 373 aaPredicted RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 ZNF423Q2M1K9 1284 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 RTP2Q5QGT7 225 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PRSS55Q6UWB4 352 aaPredicted RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PIWIL4Q7Z3Z4 852 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PDSS2Q86YH6 399 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 RP9Q8TA86 221 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 SPPL2BQ8TCT7 592 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 C8orf48Q96LL4 319 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 GCNAQ96QF7 691 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 FBXO44Q9H4M3 255 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 TRPC7Q9HCX4 862 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 CCDC167Q9P0B6 97 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 GREB1Q4ZG55 1949 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 CCDC162PA2VCL2 907 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 ADAM12O43184 909 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 TRPA1O75762 1119 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 SUPT7LO94864 414 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 GOT2P00505 430 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 HTR7P34969 479 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 TIAL1Q01085 375 aaKnown RBP eCLIP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 RALGDSQ12967 914 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 ART3Q13508 389 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 SERINC3Q13530 473 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 LBRQ14739 615 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PIGGQ5H8A4 983 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 AGAP9Q5VTM2 703 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 CYHR1Q6ZMK1 362 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 LGI2Q8N0V4 545 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 ATP6V0D2Q8N8Y2 350 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 BHLHE22Q8NFJ8 381 aaPredicted RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 NAT14Q8WUY8 206 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 BTN2A3PQ96KV6 586 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 C3orf30Q96M34 536 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 SLC39A3Q9BRY0 314 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 VTI1BQ9UEU0 232 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 STK39Q9UEW8 545 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PCDHGB4Q9UN71 923 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PCDHGB5Q9Y5G0 923 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 MTMR11A4FU01 709 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 MROH6A6NGR9 719 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 TLR5O60602 858 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 SLC6A4P31645 630 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PRKAA2P54646 552 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 RPS24P62847 133 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 NRG1Q02297 640 aaPredicted RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 TRIP4Q15650 581 aaPredicted RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 FAM26DQ5JW98 314 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 CPSF7Q8N684 471 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 UBXN10Q96LJ8 280 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 NSUN5Q96P11 429 aaKnown RBP11.66□□□□□ -0.54
FIRRE-201ENST00000427391 SPON2Q9BUD6 331 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 KLHL4Q9C0H6 718 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 PCDHAC1Q9H158 963 aa11.66□□□□□ -0.54
FIRRE-201ENST00000427391 IGLV3-10A0A075B6K4 115 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 A0A1B0GTL3 188 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 NPHS1O60500 1241 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 SLC2A3P11169 496 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 CLCN5P51795 746 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 AGKQ53H12 422 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 PITRM1Q5JRX3 1037 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 MAP3K21Q5TCX8 1036 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 FBXL19Q6PCT2 694 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 ISCA2Q86U28 154 aa11.65□□□□□ -0.54
FIRRE-201ENST00000427391 CCDC117Q8IWD4 279 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms