RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HAUS1Q96CS2 278 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 OLFM3Q96PB7 478 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 TSGA13Q96PP4 275 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 POLR1EQ9GZS1 481 aaKnown RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 LUC7LQ9NQ29 371 aaKnown RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 TOR4AQ9NXH8 423 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 IMPACTQ9P2X3 320 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 B4GALT6Q9UBX8 382 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 WASF3Q9UPY6 502 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 HS3ST3A1Q9Y663 406 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 PLXNB3Q9ULL4 1909 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 ZNF487B1APH4 448 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 LZTS3O60299 673 aaPredicted RBP13.69□□□□□ -0.22
SNX3-204ENST00000426155 PGLSO95336 258 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 IPO7O95373 1038 aaKnown RBP13.69□□□□□ -0.22
SNX3-204ENST00000426155 JCHAINP01591 159 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 PCCBP05166 539 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 ALPIP09923 528 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 ELFN1P0C7U0 828 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 CTPS1P17812 591 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 LHCGRP22888 699 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 RXRGP48443 463 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 SUOXP51687 545 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 NAP1L1P55209 391 aaKnown RBP13.69□□□□□ -0.22
SNX3-204ENST00000426155 PFN3P60673 137 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 AP1B1Q10567 949 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 DNAJC3Q13217 504 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 TAZQ16635 292 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 WSCD2Q2TBF2 565 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 CCDC157Q569K6 752 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 DENND2CQ68D51 928 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 LIPIQ6XZB0 460 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 KIAA1328Q86T90 577 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 ZSCAN30Q86W11 494 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 VSIG1Q86XK7 387 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 KATNAL2Q8IYT4 538 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 PELI3Q8N2H9 469 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 OXR1Q8N573 874 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 PLA2G15Q8NCC3 412 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 ARRDC2Q8TBH0 407 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 ASB12Q8WXK4 309 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 ZNF830Q96NB3 372 aaPredicted RBP13.69□□□□□ -0.22
SNX3-204ENST00000426155 HERPUD2Q9BSE4 406 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 MAK16Q9BXY0 300 aaKnown RBP13.69□□□□□ -0.22
SNX3-204ENST00000426155 TCEAL2Q9H3H9 227 aaPredicted RBP13.69□□□□□ -0.22
SNX3-204ENST00000426155 DNAJC28Q9NX36 388 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 SEPT10Q9P0V9 454 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 KLF15Q9UIH9 416 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 RAI2Q9Y5P3 530 aa13.69□□□□□ -0.22
SNX3-204ENST00000426155 hCG_1818297A0A087WSY0 165 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 SPTY2D1-AS1A0A0U1RR47 76 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 GRID2IPA4D2P6 1211 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 NPIPB15A6NHN6 443 aaPredicted RBP13.68□□□□□ -0.22
SNX3-204ENST00000426155 YKT6O15498 198 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 FFAR2O15552 330 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 CST8O60676 142 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 PIAS2O75928 621 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 DGKAP23743 735 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 RABIFP47224 123 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 EIF2B5Q13144 721 aaKnown RBP13.68□□□□□ -0.22
SNX3-204ENST00000426155 LRRC14Q15048 493 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 CNGA3Q16281 694 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 ARMC12Q5T9G4 340 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 KCTD16Q68DU8 428 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 ALG1LQ6GMV1 187 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 TSPAN33Q86UF1 283 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 PARGQ86W56 976 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 CCDC50Q8IVM0 306 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 RBFAQ8N0V3 343 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 SLC25A45Q8N413 288 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 CHCHD4Q8N4Q1 142 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 CNTD1Q8N815 330 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 FATE1Q969F0 183 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 SCNM1Q9BWG6 230 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 TDRD1Q9BXT4 1180 aaKnown RBP13.68□□□□□ -0.22
SNX3-204ENST00000426155 FTSJ1Q9UET6 329 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 KLK13Q9UKR3 277 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 ANGPTL2Q9UKU9 493 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 OR1A2Q9Y585 309 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 SCN8AQ9UQD0 1980 aa13.68□□□□□ -0.22
SNX3-204ENST00000426155 MACROD2A1Z1Q3 448 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 TRIM38O00635 465 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 SCAMP1O15126 338 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 PJA2O43164 708 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 FZD6O60353 706 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 NEBLO76041 1014 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 RECQL5O94762 991 aaPredicted RBP13.67□□□□□ -0.22
SNX3-204ENST00000426155 MMP2P08253 660 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 GIMD1P0DJR0 217 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 VIPR1P32241 457 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 CTNNA1P35221 906 aaKnown RBP13.67□□□□□ -0.22
SNX3-204ENST00000426155 CD86P42081 329 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 THOP1P52888 689 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 POLR2LP62875 67 aaKnown RBP13.67□□□□□ -0.22
SNX3-204ENST00000426155 IFI35P80217 286 aaPredicted RBP13.67□□□□□ -0.22
SNX3-204ENST00000426155 INPP5AQ14642 412 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 ACOX1Q15067 660 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 TCEA2Q15560 299 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 INAVAQ3KP66 663 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 TFDP3Q5H9I0 405 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms