RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 FBXO5Q9UKT4 447 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 HS3ST4Q9Y661 456 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 TRANK1O15050 2925 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 RGSL1A5PLK6 1076 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 LYNP07948 512 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 SPATA31D3P0C874 917 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 PAX3P23760 479 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 PPARGP37231 505 aaPredicted RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 AQP4P55087 323 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 MTTPP55157 894 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 BTKQ06187 659 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 ELAVL2Q12926 359 aaKnown RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 NFE2Q16621 373 aaPredicted RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 OR52E8Q6IFG1 317 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 POTEHQ6S545 545 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 SPATA31D4Q6ZUB0 917 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 ANKS3Q6ZW76 656 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 RPS27LQ71UM5 84 aaKnown RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 UBE2Q1Q7Z7E8 422 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 DSELQ8IZU8 1212 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 TXNDC5Q8NBS9 432 aaKnown RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 GATA6Q92908 595 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 ZNF689Q96CS4 500 aaPredicted RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 MRGPRX2Q96LB1 330 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 MRPL46Q9H2W6 279 aaKnown RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 SMOC2Q9H3U7 446 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 POMKQ9H5K3 350 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 ENTPD7Q9NQZ7 604 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 CACNG3O60359 315 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 IMPDH2P12268 514 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 ARSAP15289 507 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 USP46P62068 366 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 PPIGQ13427 754 aaKnown RBP eCLIP10.73□□□□□ -0.698e-7■■■□□ 18.1
CUX1-205ENST00000425244 ZNF789Q5FWF6 425 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 TRIM67Q6ZTA4 783 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 LDB1Q86U70 411 aaPredicted RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 LZTR1Q8N653 840 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 RTL3Q8N8U3 475 aaKnown RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 TMA16Q96EY4 203 aaKnown RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 GPR78Q96P69 363 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 TUBGCP5Q96RT8 1024 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 KLHL4Q9C0H6 718 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 NLRC5Q86WI3 1866 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 LCHNA4D1U4 455 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 MTMR11A4FU01 709 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 STX16-NPEPL1H3BU86 382 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 RNASEH1O60930 286 aaKnown RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 RTN3O95197 1032 aaPredicted RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 GJB5O95377 273 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 TCN1P20061 433 aaPredicted RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 ADRA1AP35348 466 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 CD86P42081 329 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 THOP1P52888 689 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 ZNF33AQ06730 810 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 ART3Q13508 389 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 MRPL58Q14197 206 aaKnown RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 TSTD2Q5T7W7 516 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 FAM219BQ5XKK7 198 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 TIGD7Q6NT04 549 aaPredicted RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 C16orf89Q6UX73 402 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 BNC2Q6ZN30 1099 aaPredicted RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 CNTN4Q8IWV2 1026 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 GBP5Q96PP8 586 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 PIDD1Q9HB75 910 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 OSER1Q9NX31 292 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 BLOC1S6Q9UL45 172 aa10.73□□□□□ -0.69
CUX1-205ENST00000425244 SPTBN5Q9NRC6 3674 aaKnown RBP10.73□□□□□ -0.69
CUX1-205ENST00000425244 ALPK3Q96L96 1907 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 OR6C75A6NL08 312 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 TARM1B6A8C7 271 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 COL6A2P12110 1019 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 ETFBP38117 255 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 CSRP3P50461 194 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 MRPS22P82650 360 aaKnown RBP10.72□□□□□ -0.69
CUX1-205ENST00000425244 FLOT2Q14254 428 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 GSTA3Q16772 222 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 TMEM240Q5SV17 173 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 MANEALQ5VSG8 457 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 PTAR1Q7Z6K3 402 aaPredicted RBP10.72□□□□□ -0.69
CUX1-205ENST00000425244 PDSS2Q86YH6 399 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 C2CD4AQ8NCU7 369 aaPredicted RBP10.72□□□□□ -0.69
CUX1-205ENST00000425244 OR6P1Q8NGX9 317 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 PPP2R3CQ969Q6 453 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 SERPINI1Q99574 410 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 NPAS2Q99743 824 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 VCX3BQ9H321 246 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 TREX1Q9NSU2 369 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 NCKIPSDQ9NZQ3 722 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 VTI1BQ9UEU0 232 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 COPG1Q9Y678 874 aaKnown RBP10.72□□□□□ -0.69
CUX1-205ENST00000425244 MYO9BQ13459 2157 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 H7C4K7 107 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 J3KR12 359 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 TLL1O43897 1013 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 EFCAB14O75071 495 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 BAIAP3O94812 1187 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 XRCC1P18887 633 aaPredicted RBP10.72□□□□□ -0.69
CUX1-205ENST00000425244 PRKAA2P54646 552 aa10.72□□□□□ -0.69
CUX1-205ENST00000425244 PIK3R6Q5UE93 754 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms