RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GARSP41250 739 aaKnown RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 RPS9P46781 194 aaKnown RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 PHC1P78364 1004 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 GRSF1Q12849 480 aaKnown RBP eCLIP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 PRKAA1Q13131 559 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 CCDC81Q6ZN84 652 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 PLEKHG7Q6ZR37 379 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 PID1Q7Z2X4 250 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 ELMOD1Q8N336 334 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 SPPL2BQ8TCT7 592 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 CALML6Q8TD86 181 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 HTR3CQ8WXA8 447 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 NDRG1Q92597 394 aaKnown RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF486Q96H40 463 aaPredicted RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 OSBPL2Q9H1P3 480 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 NEK6Q9HC98 313 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 HMG20AQ9NP66 347 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 TBC1D13Q9NVG8 400 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 CD300AQ9UGN4 299 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 MTF2Q9Y483 593 aaPredicted RBP11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 N6AMT1Q9Y5N5 214 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 CNTNAP1P78357 1384 aa11.34□□□□□ -0.59
SEC61A1-202ENST00000424880 BCLAF3A2AJT9 711 aaKnown RBP11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 RNF103O00237 685 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 PGAM1P18669 254 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 PSMA4P25789 261 aaKnown RBP11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 GTF2E2P29084 291 aaKnown RBP11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 SPRP35270 261 aaPredicted RBP11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 TPD52P55327 224 aaPredicted RBP11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 TGFB2P61812 414 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF846Q147U1 533 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 TMEM132AQ24JP5 1023 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 LRIT3Q3SXY7 679 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 FAAH2Q6GMR7 532 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 DENND6AQ8IWF6 608 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 ABI1Q8IZP0 508 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 PDPRQ8NCN5 879 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 EXT2Q93063 718 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 RNF145Q96MT1 663 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 TMEM74Q96NL1 305 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 FTHL17Q9BXU8 183 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 CHST12Q9NRB3 414 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 AGPAT4Q9NRZ5 378 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 ZNF70Q9UC06 446 aaPredicted RBP11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 DSEQ9UL01 958 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 PCDHA10Q9Y5I2 948 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 RAD54BQ9Y620 910 aa11.33□□□□□ -0.59
SEC61A1-202ENST00000424880 LOC105371267A0A1B0GV96 52 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 C2CD4BA6NLJ0 364 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CENPBD1B2RD01 187 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 PPP6CO00743 305 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 SSX4O60224 188 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 TPPPO94811 219 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 SNRPB2P08579 225 aaKnown RBP11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 IL10P22301 178 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CXCR2P25025 360 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 ACTR2P61160 394 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 NCS1P62166 190 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 STX5Q13190 355 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 DPY19L1Q2PZI1 675 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 RSBN1Q5VWQ0 802 aaPredicted RBP11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 AGMOQ6ZNB7 445 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 PAGE2Q7Z2X7 111 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CEP97Q8IW35 865 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 SLC38A6Q8IZM9 456 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 POC5Q8NA72 575 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 NUDT8Q8WV74 236 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 RPL3LQ92901 407 aaKnown RBP11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 HDAC11Q96DB2 347 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CNPY3Q9BT09 278 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 ELOVL4Q9GZR5 314 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 HOXD1Q9GZZ0 328 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 POMKQ9H5K3 350 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 DDX28Q9NUL7 540 aaKnown RBP11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 BAG5Q9UL15 447 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 H3BMM5 538 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 SLC22A1O15245 554 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 XPNPEP2O43895 674 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 HUS1O60921 280 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 DDHD2O94830 711 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 ENDOD1O94919 500 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CCND2P30279 289 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 LIMK2P53671 638 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CDH13P55290 713 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CXCL9Q07325 125 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 LAPTM5Q13571 262 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 SNAP47Q5SQN1 464 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 MAP1SQ66K74 1059 aaPredicted RBP11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 LYPD8Q6UX82 237 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 SLC16A12Q6ZSM3 486 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CCDC185Q8N715 623 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 VPS33AQ96AX1 596 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 MED30Q96HR3 178 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CITED4Q96RK1 184 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 C17orf80Q9BSJ5 609 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 BBS2Q9BXC9 721 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 ZNF518BQ9C0D4 1074 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 TMEM39BQ9GZU3 492 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms