RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ZNF248Q8NDW4 579 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 HCAR2Q8TDS4 363 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 SNRNP27Q8WVK2 155 aaKnown RBP13.08□□□□□ -0.32
VRK3-203ENST00000424804 BTN2A2Q8WVV5 523 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 ATXN7L3BQ96GX2 97 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.32
VRK3-203ENST00000424804 GDAP1L1Q96MZ0 367 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 SLC46A1Q96NT5 459 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 WRAP53Q9BUR4 548 aaKnown RBP13.08□□□□□ -0.32
VRK3-203ENST00000424804 SPASTQ9UBP0 616 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 APOBEC3BQ9UH17 382 aaKnown RBP13.08□□□□□ -0.32
VRK3-203ENST00000424804 RABGEF1Q9UJ41 708 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 SATB2Q9UPW6 733 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 SCN8AQ9UQD0 1980 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 AHCTF1Q8WYP5 2266 aa13.08□□□□□ -0.32
VRK3-203ENST00000424804 TEX51A0A1B0GUA7 166 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 CDRT15L2A8MXV6 281 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 NEMP1O14524 444 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 TOR1BO14657 336 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
VRK3-203ENST00000424804 FGF10O15520 208 aaPredicted RBP13.07□□□□□ -0.32
VRK3-203ENST00000424804 PCBP4P57723 403 aaKnown RBP13.07□□□□□ -0.32
VRK3-203ENST00000424804 RHOAP61586 193 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 KRT81Q14533 505 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 NR0B2Q15466 257 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 ALG11Q2TAA5 492 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 PARP15Q460N3 678 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 AFMIDQ63HM1 303 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 ARHGAP12Q8IWW6 846 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 EXOC2Q96KP1 924 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 IL12RB2Q99665 862 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 NCAPGQ9BPX3 1015 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 SLC39A8Q9C0K1 460 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 ABCG4Q9H172 646 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 SUV39H2Q9H5I1 410 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 CPNE5Q9HCH3 593 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 PCDH12Q9NPG4 1184 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.07□□□□□ -0.32
VRK3-203ENST00000424804 TENM4Q6N022 2769 aa13.07□□□□□ -0.32
VRK3-203ENST00000424804 FLNBO75369 2602 aaKnown RBP13.07□□□□□ -0.32
VRK3-203ENST00000424804 H3BRJ5 948 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 DFFAO00273 331 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 MUSKO15146 869 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 PRAMEF11O60813 436 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 IGSF6O95976 241 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 ERCC2P18074 760 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 IL1R2P27930 398 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 PCK1P35558 622 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 ARL4AP40617 200 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 PEX5P50542 639 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 HK3P52790 923 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 CXADRP78310 365 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 TBX2Q13207 712 aaPredicted RBP13.06□□□□□ -0.32
VRK3-203ENST00000424804 PTK2BQ14289 1009 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 UGP2Q16851 508 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 TXNRD3NBQ6F5E7 133 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 RFX8Q6ZV50 586 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 CPNE8Q86YQ8 564 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 PLA2G15Q8NCC3 412 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 CXorf40AQ8TE69 158 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 TSACCQ96A04 125 aaPredicted RBP13.06□□□□□ -0.32
VRK3-203ENST00000424804 LGMNQ99538 433 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 APOOQ9BUR5 198 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 NCKIPSDQ9NZQ3 722 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 PCDHGA8Q9Y5G5 932 aa13.06□□□□□ -0.32
VRK3-203ENST00000424804 PIEZO2Q9H5I5 2752 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 EFSO43281 561 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 TCEA3O75764 348 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 ZIC2O95409 532 aaPredicted RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 PRKCGP05129 697 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 TMEM253P0C7T8 217 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 RARAP10276 462 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 C6P13671 934 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 HTR7P34969 479 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 MMP12P39900 470 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 CSNK1DP48730 415 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 PAPOLAP51003 745 aaKnown RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 SUOXP51687 545 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 NDST2P52849 883 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 THOP1P52888 689 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 PPARDQ03181 441 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 RAD51Q06609 339 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 C19orf57Q0VDD7 668 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 RALGDSQ12967 914 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 INPP5AQ14642 412 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 MESDQ14696 234 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 LRRC14Q15048 493 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 HADHQ16836 314 aaKnown RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 BOLA3Q53S33 107 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 C3orf38Q5JPI3 329 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 FAXCQ5TGI0 409 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 RBM44Q6ZP01 1051 aaKnown RBP13.05□□□□□ -0.32
VRK3-203ENST00000424804 ARHGAP36Q6ZRI8 547 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 CLEC14AQ86T13 490 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 CAMK1DQ8IU85 385 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 SFTPA2Q8IWL1 248 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 TP53INP2Q8IXH6 220 aa13.05□□□□□ -0.32
VRK3-203ENST00000424804 PELI3Q8N2H9 469 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms