RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SEMA3CQ99985 751 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 C1QTNF7Q9BXJ2 289 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 SALL4Q9UJQ4 1053 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 PCDHGA1Q9Y5H4 931 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 PCDHA13Q9Y5I0 950 aa17.92■□□□□ 0.46
SBDSP1-202ENST00000423945 LY6G6EA0A0G2JKS1 128 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 RCCD1A6NED2 376 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 SOWAHDA6NJG2 315 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 LZTS3O60299 673 aaPredicted RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 FZD6O60353 706 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 RECQL5O94762 991 aaPredicted RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 PGLSO95336 258 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 CPP00450 1065 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 KRT1P04264 644 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 CAPNS1P04632 268 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 PDHA1P08559 390 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 SLC1A1P43005 524 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 HNRNPKP61978 463 aaKnown RBP eCLIP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 POLR2LP62875 67 aaKnown RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 DSC2Q02487 901 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 NIPAL4Q0D2K0 466 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 SMAD1Q15797 465 aaKnown RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 ZFYVE27Q5T4F4 411 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 KCTD16Q68DU8 428 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 TIGD7Q6NT04 549 aaPredicted RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 NPNTQ6UXI9 565 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 CCDC170Q8IYT3 715 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 CBARPQ8N350 705 aaPredicted RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 ARRDC2Q8TBH0 407 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 PDCD6IPQ8WUM4 868 aaKnown RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 PIH1D2Q8WWB5 315 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 FUBP1Q96AE4 644 aaKnown RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 RNF25Q96BH1 459 aaPredicted RBP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 HDAC11Q96DB2 347 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 SMIM14Q96QK8 99 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 PANX2Q96RD6 677 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 RBM22Q9NW64 420 aaKnown RBP eCLIP17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 U3KQA8 63 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 MYLKQ15746 1914 aa17.91■□□□□ 0.46
SBDSP1-202ENST00000423945 ZZEF1O43149 2961 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 DMXL2Q8TDJ6 3036 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 TOR1BO14657 336 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 SCAMP1O15126 338 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 RFPL3O75679 317 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 HLA-DQB2P05538 268 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 ELFN1P0C7U0 828 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 MYF5P13349 255 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 JUNDP17535 347 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 CKMT2P17540 419 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 LHCGRP22888 699 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 THOP1P52888 689 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 INPP5AQ14642 412 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 CNGA3Q16281 694 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 TAZQ16635 292 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 MFSD7Q6UXD7 560 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 MACC1Q6ZN28 852 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 RHOT1Q8IXI2 618 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 COQ10AQ96MF6 247 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 MCCC1Q96RQ3 725 aaPredicted RBP17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 LGMNQ99538 433 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 APOOQ9BUR5 198 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 POLR1EQ9GZS1 481 aaKnown RBP17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 NLGN3Q9NZ94 848 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 REXO2Q9Y3B8 237 aaKnown RBP17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 PPIL1Q9Y3C6 166 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 ALG6Q9Y672 507 aa17.9■□□□□ 0.46
SBDSP1-202ENST00000423945 A0A0U1RQS6 177 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 A0A1W2PQ67 120 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 FAM149AA5PLN7 773 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 NPIPB15A6NHN6 443 aaPredicted RBP17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 K7ESM1 405 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 GCATO75600 419 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 PCCBP05166 539 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 TNNT1P13805 278 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 CCNB1P14635 433 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 ACP1P24666 158 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 VIPR1P32241 457 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 MARCKSL1P49006 195 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 PPIDQ08752 370 aaKnown RBP17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 ZBTB17Q13105 803 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 PTK2BQ14289 1009 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 RAD9BQ6WBX8 426 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 CCDC13Q8IYE1 715 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 PHACTR4Q8IZ21 702 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 PAF1Q8N7H5 531 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 CNTD1Q8N815 330 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 KDF1Q8NAX2 398 aaPredicted RBP17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 OLFM3Q96PB7 478 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 IL12RB2Q99665 862 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 CLPBQ9H078 707 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 PHTF1Q9UMS5 762 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 OR1A2Q9Y585 309 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 RAI2Q9Y5P3 530 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 CSNK1G3Q9Y6M4 447 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 CHD6Q8TD26 2715 aa17.89■□□□□ 0.45
SBDSP1-202ENST00000423945 KNTC1P50748 2209 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 ASXL3Q9C0F0 2248 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 A0A0A6YYK5 440 aaPredicted RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 KCNK1O00180 336 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 AQP9O43315 295 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms