RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 ACAD11Q709F0 780 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 ANKRD33Q7Z3H0 272 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 LDB1Q86U70 411 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 EGFL6Q8IUX8 553 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 DNAJC1Q96KC8 554 aaKnown RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 DEFB118Q96PH6 123 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 SPON2Q9BUD6 331 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 CCDC28BQ9BUN5 200 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 CINPQ9BW66 212 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 STX18Q9P2W9 335 aaKnown RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 GOLGA8QA0A0J9YX86 632 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 GOLGA8OA6NCC3 632 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 GOLGA8NF8WBI6 632 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 RPP40O75818 363 aaKnown RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 GOT2P00505 430 aaKnown RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 COX4I1P13073 169 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 CORO1AP31146 461 aaKnown RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 CCDC6Q16204 474 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 LSM12Q3MHD2 195 aaKnown RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 TPGS2Q68CL5 300 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 FAM45BPQ6NSW5 357 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 RIPOR1Q6ZS17 1223 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 CHST9Q7L1S5 443 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 RNF135Q8IUD6 432 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 PNPLA1Q8N8W4 532 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 KDM1BQ8NB78 822 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 FAM45AQ8TCE6 357 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 ZNF570Q96NI8 536 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 PANX3Q96QZ0 392 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 NUF2Q9BZD4 464 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 PPP1R12CQ9BZL4 782 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 SUDS3Q9H7L9 328 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 CORO1CQ9ULV4 474 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-202ENST00000422785 TRIM17Q9Y577 477 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 MICAL3Q7RTP6 2002 aa13.84□□□□□ -0.19
CDCA3-202ENST00000422785 SLC22A2O15244 555 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 CD3EAPO15446 510 aaKnown RBP13.83□□□□□ -0.19
CDCA3-202ENST00000422785 HOXB8P17481 243 aaPredicted RBP13.83□□□□□ -0.19
CDCA3-202ENST00000422785 EPHA3P29320 983 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 CDKN2DP55273 166 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 SLC34A1Q06495 639 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 NSUN2Q08J23 767 aaKnown RBP eCLIP13.83□□□□□ -0.19
CDCA3-202ENST00000422785 ADGRF1Q5T601 910 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 MRNIPQ6NTE8 343 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 SETD3Q86TU7 594 aaPredicted RBP13.83□□□□□ -0.19
CDCA3-202ENST00000422785 SHCBP1LQ9BZQ2 653 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 GKN1Q9NS71 199 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 OGDHLQ9ULD0 1010 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 CDYLQ9Y232 598 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 ACTL7AQ9Y615 435 aa13.83□□□□□ -0.19
CDCA3-202ENST00000422785 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.83□□□□□ -0.2
CDCA3-202ENST00000422785 LOC100653049A0A140TA62 436 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 CCDC162PA2VCL2 907 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 NEMP1O14524 444 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 KRT34O76011 436 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 IPO13O94829 963 aaKnown RBP13.83□□□□□ -0.2
CDCA3-202ENST00000422785 ATN1P54259 1190 aaPredicted RBP13.83□□□□□ -0.2
CDCA3-202ENST00000422785 ZNF177Q13360 481 aaPredicted RBP13.83□□□□□ -0.2
CDCA3-202ENST00000422785 FRMD7Q6ZUT3 714 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 CPSF7Q8N684 471 aaKnown RBP13.83□□□□□ -0.2
CDCA3-202ENST00000422785 GIMAP7Q8NHV1 300 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 ACTRT2Q8TDY3 377 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 ANKRD49Q8WVL7 239 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 TRMT2BQ96GJ1 504 aaKnown RBP13.83□□□□□ -0.2
CDCA3-202ENST00000422785 RTKNQ9BST9 563 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 ARHGAP26Q9UNA1 814 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 SSX2IPQ9Y2D8 614 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 A0A1B0GVM2 712 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 TCAF2A6NFQ2 919 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 NEMP2A6NFY4 417 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 A8MT66 165 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 TBX10O75333 385 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 SOD2P04179 222 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 RHOCP08134 193 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 CES1P23141 567 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 ALDH1A3P47895 512 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 VEGFBP49765 207 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 PTPRCAPQ14761 206 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 RALGPS1Q5JS13 557 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 C1orf146Q5VVC0 180 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 TMEM207Q6UWW9 146 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 OSBPL1AQ9BXW6 950 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 RNF38Q9H0F5 515 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 CYP4F11Q9HBI6 524 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 TBC1D30Q9Y2I9 924 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 CRYL1Q9Y2S2 319 aa13.83□□□□□ -0.2
CDCA3-202ENST00000422785 ARIH1Q9Y4X5 557 aaPredicted RBP13.83□□□□□ -0.2
CDCA3-202ENST00000422785 INSIG1O15503 277 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 BUD23O43709 281 aaKnown RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 CCNT2O60583 730 aaKnown RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 CRTAMO95727 393 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 MYCP01106 439 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 CR2P20023 1033 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 ITGAXP20702 1163 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 OGNP20774 298 aaKnown RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 KCNA5P22460 613 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 FDXRP22570 491 aa13.82□□□□□ -0.2
CDCA3-202ENST00000422785 ADSLP30566 484 aaPredicted RBP13.82□□□□□ -0.2
CDCA3-202ENST00000422785 RGRP47804 291 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms