RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ZSCAN31Q96LW9 406 aaPredicted RBP4.04□□□□□ -1.76
LINC00397-201ENST00000422074 PCDH9Q9HC56 1237 aa4.04□□□□□ -1.76
LINC00397-201ENST00000422074 DDX4Q9NQI0 724 aaKnown RBP4.04□□□□□ -1.76
LINC00397-201ENST00000422074 SLC25A10Q9UBX3 287 aaPredicted RBP4.04□□□□□ -1.76
LINC00397-201ENST00000422074 SNX9Q9Y5X1 595 aa4.04□□□□□ -1.76
LINC00397-201ENST00000422074 MID1O15344 667 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 GRID2O43424 1007 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 PLRG1O43660 514 aaKnown RBP4.03□□□□□ -1.76
LINC00397-201ENST00000422074 GUCY1B2O75343 617 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 URODP06132 367 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 SP1P08047 785 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 MMP2P08253 660 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 ANOS1P23352 680 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 DGKAP23743 735 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 STX2P32856 288 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 EFNB1P98172 346 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 ZBTB17Q13105 803 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 NEDD9Q14511 834 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 TAF11Q15544 211 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 ATP13A5Q4VNC0 1218 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 NAA35Q5VZE5 725 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 FOXL2NBQ6ZUU3 175 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 LRRC8DQ7L1W4 858 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 TADA2BQ86TJ2 420 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 SATL1Q86VE3 508 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 ANKRD18AQ8IVF6 992 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 CHERPQ8IWX8 916 aaKnown RBP4.03□□□□□ -1.76
LINC00397-201ENST00000422074 ZNF441Q8N8Z8 693 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 SCCPDHQ8NBX0 429 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 PPM1EQ8WY54 764 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 FIG4Q92562 907 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 TANKQ92844 425 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 FBXL8Q96CD0 374 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 ZC3HAV1LQ96H79 300 aaKnown RBP4.03□□□□□ -1.76
LINC00397-201ENST00000422074 NODALQ96S42 347 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 SPRY4Q9C004 299 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 ESRP2Q9H6T0 727 aaKnown RBP4.03□□□□□ -1.76
LINC00397-201ENST00000422074 C17orf75Q9HAS0 396 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 SDF2L1Q9HCN8 221 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 NOX4Q9NPH5 578 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 MKKSQ9NPJ1 570 aaPredicted RBP4.03□□□□□ -1.76
LINC00397-201ENST00000422074 CISD1Q9NZ45 108 aaKnown RBP4.03□□□□□ -1.76
LINC00397-201ENST00000422074 IL1RAPL1Q9NZN1 696 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 C1RLQ9NZP8 487 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 ADAM18Q9Y3Q7 739 aa4.03□□□□□ -1.76
LINC00397-201ENST00000422074 HNRNPCL2B2RXH8 293 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 TIPRLO75663 272 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 MT-CYBP00156 380 aaPredicted RBP4.02□□□□□ -1.77
LINC00397-201ENST00000422074 ETFAP13804 333 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 AMD1P17707 334 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 MCM3P25205 808 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 ACSM2AQ08AH3 577 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 KRT24Q2M2I5 525 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 TXNDC8Q6A555 127 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 PLEKHA7Q6IQ23 1121 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 ANKRD54Q6NXT1 300 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 TMEM81Q6P7N7 255 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 B3GNT6Q6ZMB0 384 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 LINGO2Q7L985 606 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 NOXA1Q86UR1 476 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 LRRTM4Q86VH4 590 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 DCUN1D3Q8IWE4 304 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 FOXRED2Q8IWF2 684 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 BEST2Q8NFU1 509 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 ZCCHC10Q8TBK6 192 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 C3orf30Q96M34 536 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 FUZQ9BT04 418 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 INTS2Q9H0H0 1204 aaKnown RBP4.02□□□□□ -1.77
LINC00397-201ENST00000422074 PLEKHA4Q9H4M7 779 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 TCF7L2Q9NQB0 619 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 HSPB7Q9UBY9 170 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 CNOT7Q9UIV1 285 aaKnown RBP4.02□□□□□ -1.77
LINC00397-201ENST00000422074 HSF4Q9ULV5 492 aa4.02□□□□□ -1.77
LINC00397-201ENST00000422074 SOCS6O14544 535 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 TPD52L2O43399 206 aaKnown RBP4.01□□□□□ -1.77
LINC00397-201ENST00000422074 EDN2P20800 178 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 TCEA1P23193 301 aaKnown RBP4.01□□□□□ -1.77
LINC00397-201ENST00000422074 ZNF132P52740 706 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 EFNA5P52803 228 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 VAMP2P63027 116 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 TLE2Q04725 743 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 GRIK3Q13003 919 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 ITGADQ13349 1161 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 HIST2H2ACQ16777 129 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-201ENST00000422074 PAPPA-AS1Q5QFB9 102 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 CYP26C1Q6V0L0 522 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 GPAT4Q86UL3 456 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 LMNTD1Q8N9Z9 388 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 ZBTB8BQ8NAP8 495 aaPredicted RBP4.01□□□□□ -1.77
LINC00397-201ENST00000422074 NOC3LQ8WTT2 800 aaKnown RBP4.01□□□□□ -1.77
LINC00397-201ENST00000422074 SECTM1Q8WVN6 248 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 GCC1Q96CN9 775 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 CSF3RQ99062 836 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 HAUS8Q9BT25 410 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 POLR3GLQ9BT43 218 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 MMP28Q9H239 520 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 KCNN2Q9H2S1 579 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 KLHL1Q9NR64 748 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 PPP1R14DQ9NXH3 145 aa4.01□□□□□ -1.77
LINC00397-201ENST00000422074 MCM9Q9NXL9 1143 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms