RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 TRAF6Q9Y4K3 522 aa16.71■□□□□ 0.27
PKP4-204ENST00000421462 H3BMM5 538 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 CNOT3O75175 753 aaKnown RBP16.71■□□□□ 0.26
PKP4-204ENST00000421462 IDO1P14902 403 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 CAPGP40121 348 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 TPI1P60174 286 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 ZNF789Q5FWF6 425 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 SLC2A7Q6PXP3 512 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 AFAP1L2Q8N4X5 818 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.26
PKP4-204ENST00000421462 VPS33AQ96AX1 596 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 HDAC11Q96DB2 347 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 CENPNQ96H22 339 aaPredicted RBP16.71■□□□□ 0.26
PKP4-204ENST00000421462 DNAI2Q9GZS0 605 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 MAF1Q9H063 256 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 PDZD7Q9H5P4 517 aa16.71■□□□□ 0.26
PKP4-204ENST00000421462 LY75O60449 1722 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 TARM1B6A8C7 271 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 PTGES3LE9PB15 166 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 PMPCBO75439 489 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 BAIAP3O94812 1187 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 ALBP02768 609 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 POLD3Q15054 466 aaPredicted RBP16.7■□□□□ 0.26
PKP4-204ENST00000421462 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 HFE2Q6ZVN8 426 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 EXOC8Q8IYI6 725 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 ZNF420Q8TAQ5 688 aaPredicted RBP16.7■□□□□ 0.26
PKP4-204ENST00000421462 TMEM74Q96NL1 305 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 AGPAT4Q9NRZ5 378 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 PIGVQ9NUD9 493 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 GNPTGQ9UJJ9 305 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 PTBP2Q9UKA9 531 aaKnown RBP16.7■□□□□ 0.26
PKP4-204ENST00000421462 BTRCQ9Y297 605 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 TCAF1Q9Y4C2 921 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 ZBTB42B2RXF5 422 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 ARPC2O15144 300 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 SNAP91O60641 907 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 ALDOCP09972 364 aaKnown RBP16.7■□□□□ 0.26
PKP4-204ENST00000421462 ATP5F1P24539 256 aaPredicted RBP16.7■□□□□ 0.26
PKP4-204ENST00000421462 SLC1A2P43004 574 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 PKDCCQ504Y2 493 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 CYBRD1Q53TN4 286 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 NOMO2Q5JPE7 1267 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 REPS2Q8NFH8 660 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 MAELQ96JY0 434 aaKnown RBP16.7■□□□□ 0.26
PKP4-204ENST00000421462 CCDC138Q96M89 665 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 GPR78Q96P69 363 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 CSF3RQ99062 836 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 C1orf50Q9BV19 199 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 RAD21L1Q9H4I0 556 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 ALG9Q9H6U8 611 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 EXD2Q9NVH0 621 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 MAP10Q9P2G4 905 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 KIAA1257Q9ULG3 409 aa16.7■□□□□ 0.26
PKP4-204ENST00000421462 IGKV6D-21A0A0A0MT36 114 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 A8MT66 165 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 KPNA6O60684 536 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 CLPXO76031 633 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 SLC4A1P02730 911 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 PTPRAP18433 802 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 CYP2B6P20813 491 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 ACADVLP49748 655 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 PCSK7Q16549 785 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 PRR23BQ6ZRT6 265 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 CLEC4FQ8N1N0 589 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 TOP1MTQ969P6 601 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 UHRF1Q96T88 793 aaPredicted RBP16.69■□□□□ 0.26
PKP4-204ENST00000421462 EPS8L2Q9H6S3 715 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 ATAD3AQ9NVI7 634 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 LRRC14BA6NHZ5 514 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 TOMM70O94826 608 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 ALDH2P05091 517 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 PGK2P07205 417 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 CAPN3P20807 821 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 MATKP42679 507 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 NKX2-5P52952 324 aaPredicted RBP16.69■□□□□ 0.26
PKP4-204ENST00000421462 SNX16P57768 344 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 FRG1Q14331 258 aaKnown RBP16.69■□□□□ 0.26
PKP4-204ENST00000421462 MFSD2AQ8NA29 543 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 SPATA33Q96N06 139 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 KCNA7Q96RP8 456 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 R3HDMLQ9H3Y0 253 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 NANOGQ9H9S0 305 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 CMTM6Q9NX76 183 aa16.69■□□□□ 0.26
PKP4-204ENST00000421462 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.69■□□□□ 0.26
PKP4-204ENST00000421462 ZNF701M0R085 212 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 DFFAO00273 331 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 PCYT1AP49585 367 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 CXCR3P49682 368 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 CCT8P50990 548 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 FPGSQ05932 587 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 BST2Q10589 180 aaKnown RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 PPIL2Q13356 520 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 GRB7Q14451 532 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 SPCS2Q15005 226 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 GJC2Q5T442 439 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 CENPIQ92674 756 aaPredicted RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 GMLQ99445 158 aa16.68■□□□□ 0.26
PKP4-204ENST00000421462 MRPL57Q9BQC6 102 aaKnown RBP16.68■□□□□ 0.26
PKP4-204ENST00000421462 SEZ6LQ9BYH1 1024 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms