RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 CCDC3Q9BQI4 270 aa17.47■□□□□ 0.39
MSH6-203ENST00000420813 DPH1Q9BZG8 443 aa17.47■□□□□ 0.39
MSH6-203ENST00000420813 KLQ9UEF7 1012 aa17.47■□□□□ 0.39
MSH6-203ENST00000420813 CNOT8Q9UFF9 292 aaKnown RBP17.47■□□□□ 0.39
MSH6-203ENST00000420813 DGKBQ9Y6T7 804 aa17.47■□□□□ 0.39
MSH6-203ENST00000420813 SCN8AQ9UQD0 1980 aa17.47■□□□□ 0.39
MSH6-203ENST00000420813 A0A1W2PNU3 283 aaPredicted RBP17.46■□□□□ 0.39
MSH6-203ENST00000420813 DFFAO00273 331 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 NTN3O00634 580 aaPredicted RBP17.46■□□□□ 0.39
MSH6-203ENST00000420813 LRCH4O75427 683 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 CELA2BP08218 269 aaPredicted RBP17.46■□□□□ 0.39
MSH6-203ENST00000420813 MYBL1P10243 752 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 RBMS1P29558 406 aaKnown RBP17.46■□□□□ 0.39
MSH6-203ENST00000420813 PCK1P35558 622 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 RENBPP51606 427 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 TMPRSS3P57727 454 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 SRP54P61011 504 aaKnown RBP17.46■□□□□ 0.39
MSH6-203ENST00000420813 AP1S1P61966 158 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 CXADRP78310 365 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 BCL2L1Q07817 233 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 RALGDSQ12967 914 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 DPYSQ14117 519 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 SPIDRQ14159 915 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 OR6C4Q8NGE1 309 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 PCDH19Q8TAB3 1148 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 KCNE4Q8WWG9 221 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 SPOCK2Q92563 424 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 ZNF599Q96NL3 588 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 SLC46A1Q96NT5 459 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 TRIM7Q9C029 511 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 ZWILCHQ9H900 591 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 MRPL47Q9HD33 250 aaKnown RBP17.46■□□□□ 0.39
MSH6-203ENST00000420813 TMEM63CQ9P1W3 806 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 SEPT3Q9UH03 358 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 OR1A2Q9Y585 309 aa17.46■□□□□ 0.39
MSH6-203ENST00000420813 DDX3XO00571 662 aaKnown RBP eCLIP17.45■□□□□ 0.38
MSH6-203ENST00000420813 RECQL5O94762 991 aaPredicted RBP17.45■□□□□ 0.38
MSH6-203ENST00000420813 PCCBP05166 539 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 HOXC4P09017 264 aaPredicted RBP17.45■□□□□ 0.38
MSH6-203ENST00000420813 ELFN1P0C7U0 828 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 KIAA1024LP59773 190 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 SKOR1P84550 965 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 KLHL30Q0D2K2 578 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 TMCO4Q5TGY1 634 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 E4F1Q66K89 784 aaPredicted RBP17.45■□□□□ 0.38
MSH6-203ENST00000420813 LIPIQ6XZB0 460 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 DPPA4Q7L190 304 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 KYQ8NBH2 561 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 WDR36Q8NI36 951 aaKnown RBP17.45■□□□□ 0.38
MSH6-203ENST00000420813 ZNF653Q96CK0 615 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 CCDC97Q96F63 343 aaPredicted RBP17.45■□□□□ 0.38
MSH6-203ENST00000420813 PRR11Q96HE9 360 aaPredicted RBP17.45■□□□□ 0.38
MSH6-203ENST00000420813 NAF1Q96HR8 494 aaKnown RBP17.45■□□□□ 0.38
MSH6-203ENST00000420813 RBM15Q96T37 977 aaKnown RBP eCLIP17.45■□□□□ 0.388e-10■■□□□ 12.9
MSH6-203ENST00000420813 CWC15Q9P013 229 aaKnown RBP17.45■□□□□ 0.38
MSH6-203ENST00000420813 GULP1Q9UBP9 304 aa17.45■□□□□ 0.38
MSH6-203ENST00000420813 HELZ2Q9BYK8 2649 aaKnown RBP17.44■□□□□ 0.38
MSH6-203ENST00000420813 COL6A6A6NMZ7 2263 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 CCDC187A0A096LP49 1063 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 A0A1B0GTH6 734 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.44■□□□□ 0.38
MSH6-203ENST00000420813 A0A1W2PQ67 120 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 CDRT15L2A8MXV6 281 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 H3BRJ5 948 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 CACNB4O00305 520 aaPredicted RBP17.44■□□□□ 0.38
MSH6-203ENST00000420813 TRAFD1O14545 582 aaPredicted RBP17.44■□□□□ 0.38
MSH6-203ENST00000420813 TNFP01375 233 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 PRKCGP05129 697 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 KELP23276 732 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 HSPA9P38646 679 aaKnown RBP17.44■□□□□ 0.38
MSH6-203ENST00000420813 PDX1P52945 283 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 C19orf57Q0VDD7 668 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 LBRQ14739 615 aaKnown RBP17.44■□□□□ 0.38
MSH6-203ENST00000420813 DPYSL2Q16555 572 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 ARHGAP36Q6ZRI8 547 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 RD3Q7Z3Z2 195 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 ARL14Q8N4G2 192 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 PAF1Q8N7H5 531 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 PLA2G15Q8NCC3 412 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 OR56A4Q8NGH8 313 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 PDXPQ96GD0 296 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 LIN37Q96GY3 246 aaPredicted RBP17.44■□□□□ 0.38
MSH6-203ENST00000420813 ISCUQ9H1K1 167 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 GPR34Q9UPC5 381 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 SSUH2Q9Y2M2 353 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 ATMQ13315 3056 aa17.44■□□□□ 0.38
MSH6-203ENST00000420813 TMX2-CTNND1H3BSU7 103 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 TNFRSF10CO14798 259 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 KLK10O43240 276 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 SOCS5O75159 536 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 TRIM23P36406 574 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 ARL4AP40617 200 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 SCNN1BP51168 640 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 BOLA3Q53S33 107 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 FIGNQ5HY92 759 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 CLEC14AQ86T13 490 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 FUBP1Q96AE4 644 aaKnown RBP17.43■□□□□ 0.38
MSH6-203ENST00000420813 CCDC74AQ96AQ1 378 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 SYNDIG1Q9H7V2 258 aa17.43■□□□□ 0.38
MSH6-203ENST00000420813 SIRPGQ9P1W8 387 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms