RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TGM2P21980 687 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 XPAP23025 273 aaPredicted RBP11.1□□□□□ -0.63
SSBP3-206ENST00000420121 ARL4AP40617 200 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 PEX5P50542 639 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 SCNN1BP51168 640 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 AP1S1P61966 158 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 TPM4P67936 248 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 BCL2L1Q07817 233 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 PTK2BQ14289 1009 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 IHHQ14623 411 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 INPP5AQ14642 412 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 NFATC4Q14934 902 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 ALG11Q2TAA5 492 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 ATP13A4Q4VNC1 1196 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 PRRT3Q5FWE3 981 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 PERM1Q5SV97 790 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 CCDC122Q5T0U0 273 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 TMCO3Q6UWJ1 677 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 DPPA4Q7L190 304 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 SLC35F3Q8IY50 421 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 CBARPQ8N350 705 aaPredicted RBP11.1□□□□□ -0.63
SSBP3-206ENST00000420121 IFI44Q8TCB0 444 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 BTN2A2Q8WVV5 523 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 CRELD1Q96HD1 420 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 MGME1Q9BQP7 344 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 APOOQ9BUR5 198 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 PACSIN1Q9BY11 444 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 SPASTQ9UBP0 616 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 IP6K2Q9UHH9 426 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 OR1A2Q9Y585 309 aa11.1□□□□□ -0.63
SSBP3-206ENST00000420121 A0A1W2PNU3 283 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-206ENST00000420121 GOLGA6L19H0YKK7 550 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 YY2O15391 372 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 MFSD11O43934 449 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 RECQL5O94762 991 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-206ENST00000420121 HK3P52790 923 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 ADKP55263 362 aaKnown RBP11.09□□□□□ -0.63
SSBP3-206ENST00000420121 TAS2R40P59535 323 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 MAXP61244 160 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 PPARDQ03181 441 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 TRAF2Q12933 501 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 MTM1Q13496 603 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 DPYSL3Q14195 570 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 PTPRRQ15256 657 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 CDKN3Q16667 212 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 HS1BP3Q53T59 392 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 C6orf132Q5T0Z8 1188 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 ERAP2Q6P179 960 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 PCDH19Q8TAB3 1148 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 ZNF564Q8TBZ8 553 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-206ENST00000420121 HNRNPLLQ8WVV9 542 aaKnown RBP11.09□□□□□ -0.63
SSBP3-206ENST00000420121 TSACCQ96A04 125 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-206ENST00000420121 COQ10AQ96MF6 247 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 NUDCD1Q96RS6 583 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 DNAJC7Q99615 494 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 IL12RB2Q99665 862 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 NOD2Q9HC29 1040 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 RCOR3Q9P2K3 495 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-206ENST00000420121 B4GALT6Q9UBX8 382 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 PCDHGC4Q9Y5F7 938 aa11.09□□□□□ -0.63
SSBP3-206ENST00000420121 UNC13CQ8NB66 2214 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 MGAQ8IWI9 3026 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-206ENST00000420121 TMEM202A6NGA9 273 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 TMEM110-MUSTN1A8MSY1 372 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 MYO1FO00160 1098 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 BRINP1O60477 761 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 SOCS5O75159 536 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 PCCBP05166 539 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 LHCGRP22888 699 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 TRIM23P36406 574 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.64
SSBP3-206ENST00000420121 EIF2S3P41091 472 aaKnown RBP11.08□□□□□ -0.64
SSBP3-206ENST00000420121 DUSP3P51452 185 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-206ENST00000420121 RENBPP51606 427 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 CDH6P55285 790 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 ZNF235Q14590 738 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 PAFAH1B3Q15102 231 aaKnown RBP11.08□□□□□ -0.64
SSBP3-206ENST00000420121 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 CNGA3Q16281 694 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 SLC18A3Q16572 532 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 CFAP58Q5T655 872 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 FAXCQ5TGI0 409 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 NCBP2-AS2Q69YL0 99 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 EFL1Q7Z2Z2 1120 aaKnown RBP11.08□□□□□ -0.64
SSBP3-206ENST00000420121 PDZD3Q86UT5 571 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 HID1Q8IV36 788 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 ATPAF2Q8N5M1 289 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 TEX26Q8N6G2 289 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 SNIP1Q8TAD8 396 aaKnown RBP11.08□□□□□ -0.64
SSBP3-206ENST00000420121 OR1E3Q8WZA6 343 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 FAF2Q96CS3 445 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 PDXPQ96GD0 296 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 LGR4Q9BXB1 951 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 SLC13A1Q9BZW2 595 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 FGF22Q9HCT0 170 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 ATRXP46100 2492 aa11.08□□□□□ -0.64
SSBP3-206ENST00000420121 CPED1A4D0V7 1026 aa11.07□□□□□ -0.64
SSBP3-206ENST00000420121 A8MX80 341 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms