RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 C10orf120Q5SQS8 335 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 C6orf52Q5T4I8 152 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 PLPP4Q5VZY2 271 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 DCDC5Q6ZRR9 648 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 PSMG2Q969U7 264 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 FCRL2Q96LA5 508 aaPredicted RBP13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 ZNF512Q96ME7 567 aaPredicted RBP13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 EMILIN2Q9BXX0 1053 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 OSBPL2Q9H1P3 480 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 CCSER2Q9H7U1 834 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 LIN28AQ9H9Z2 209 aaKnown RBP13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 PRDM16Q9HAZ2 1276 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 XAB2Q9HCS7 855 aaKnown RBP13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 VPS45Q9NRW7 570 aa13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 HEMK1Q9Y5R4 338 aaPredicted RBP13.41□□□□□ -0.26
SFTPA1-202ENST00000419470 SOBPA7XYQ1 873 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 TRIM49D1C9J1S8 452 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 EEF2KO00418 725 aaKnown RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 GRM6O15303 877 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 KRT37O76014 449 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 CAPNS1P04632 268 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 GSTT2BP0CG30 244 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 PSMC3P17980 439 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 ZNF135P52742 658 aaPredicted RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 TUBA4AP68366 448 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 STX3Q13277 289 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 ZNF829Q3KNS6 432 aaPredicted RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 NCBP2-AS2Q69YL0 99 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 DNAJB7Q7Z6W7 309 aaPredicted RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 SLC26A11Q86WA9 606 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 NEURL2Q9BR09 285 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 FAM96AQ9H5X1 160 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 MARCH2Q9P0N8 246 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 OR12D3Q9UGF7 316 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 CNOT11Q9UKZ1 510 aaKnown RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 ATG2AQ2TAZ0 1938 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 BPGMP07738 259 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 SNRPAP09012 282 aaKnown RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 TBX4P57082 545 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 EIF3EP60228 445 aaKnown RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 PLD1Q13393 1074 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 TRIP4Q15650 581 aaPredicted RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 TAF12Q16514 161 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 CLPPQ16740 277 aaPredicted RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 ZNF362Q5T0B9 420 aaPredicted RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 ARMCX6Q7L4S7 300 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 PIWIL2Q8TC59 973 aaKnown RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 CDK5RAP1Q96SZ6 601 aaKnown RBP13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 C20orf27Q9GZN8 174 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 BCAP29Q9UHQ4 241 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 CROTQ9UKG9 612 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 CDH7Q9ULB5 785 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 ARHGAP26Q9UNA1 814 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 SNX10Q9Y5X0 201 aa13.4□□□□□ -0.26
SFTPA1-202ENST00000419470 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 MCF2LO15068 1137 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 PAGE1O75459 146 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 CSPG5O95196 566 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 IGLV3-27P01718 113 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 SLC2A3P11169 496 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 CDKL1Q00532 357 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 GBE1Q04446 702 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 CCDC153Q494R4 210 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 LGSNQ5TDP6 509 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 NIPAL1Q6NVV3 410 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 ITIH5Q86UX2 942 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 MIB1Q86YT6 1006 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 CHERPQ8IWX8 916 aaKnown RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 KREMEN2Q8NCW0 462 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 DDHD1Q8NEL9 900 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 SAMD11Q96NU1 681 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TRPM5Q9NZQ8 1165 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 UXTQ9UBK9 157 aaPredicted RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 DOLKQ9UPQ8 538 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 YBX2Q9Y2T7 364 aaKnown RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 MFHAS1Q9Y4C4 1052 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 GPC6Q9Y625 555 aaPredicted RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TRANK1O15050 2925 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 PDE4DIPQ5VU43 2346 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 H0YJX3 145 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 GOLGA8TH3BQL2 631 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 DCLK1O15075 740 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 LRIG2O94898 1065 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 H6PDO95479 791 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 GLUD1P00367 558 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 C8BP07358 591 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 IRS1P35568 1242 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 RXRGP48443 463 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 PPP3CCP48454 512 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 NR2C2P49116 596 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 TPI1P60174 286 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 ERVK-21P61565 698 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 SLC10A2Q12908 348 aaPredicted RBP13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 ANKDD1AQ495B1 522 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 HECTD3Q5T447 861 aa13.39□□□□□ -0.27
SFTPA1-202ENST00000419470 ARTNQ5T4W7 220 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms