RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 DTLQ9NZJ0 730 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 BAG5Q9UL15 447 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC39A10Q9ULF5 831 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 DNAH12Q6ZR08 3092 aa8.06□□□□□ -1.12
HMGXB4-202ENST00000418170 C16orf96A6NNT2 1141 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 M0QYV0 167 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 ARPC2O15144 300 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GRAP2O75791 330 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GABARAPO95166 117 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 ZBTB7AO95365 584 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CDH1P12830 882 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CD40LGP29965 261 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 SERPINB10P48595 397 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 C1QTNF8P60827 252 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GHRHRQ02643 423 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 BST2Q10589 180 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 ORC1Q13415 861 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CARTPTQ16568 116 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PPP1R3AQ16821 1122 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PRMT9Q6P2P2 845 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 FAM183BPQ6ZVS7 135 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 FAM160B2Q86V87 743 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 RETREG3Q86VR2 466 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PAPD5Q8NDF8 572 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 OR7A2PQ8NGA2 310 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GABPB2Q8TAK5 448 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CLEC4DQ8WXI8 215 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 HDAC2Q92769 488 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GPR22Q99680 433 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 DGCR6LQ9BY27 220 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 OR2B2Q9GZK3 357 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 ADNPQ9H2P0 1102 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 HPS4Q9NQG7 708 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GTSE1Q9NYZ3 720 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 XPR1Q9UBH6 696 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 RUVBL2Q9Y230 463 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 TRIP11Q15643 1979 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 BBIP1A8MTZ0 92 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 VWA5AO00534 786 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 NADKO95544 446 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PPP5CP53041 499 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GABARAPL2P60520 117 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 COPZ1P61923 177 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PTPN11Q06124 597 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC13A2Q13183 592 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 LAMC2Q13753 1193 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PRPSAP1Q14558 356 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PSMD5Q16401 504 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CYP51A1Q16850 503 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 DGUOKQ16854 277 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 DPY19L1Q2PZI1 675 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 TRAPPC3LQ5T215 181 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PMF1Q6P1K2 205 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CNSTQ6PJW8 725 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 TBC1D21Q8IYX1 336 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CENPLQ8N0S6 344 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC22A17Q8WUG5 538 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 KCTD4Q8WVF5 259 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CAMKK2Q96RR4 588 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 FBXO28Q9NVF7 368 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PMF1-BGLAPU3KQ54 211 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 DICER1Q9UPY3 1922 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 MAGEB16A2A368 324 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 HACD1B0YJ81 288 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 LDLRP01130 860 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 ICAM1P05362 532 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 MYL3P08590 195 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC35E2BP0CK96 405 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PRKCAP17252 672 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 ITIH1P19827 911 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 DNAJB1P25685 340 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PSMB4P28070 264 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CASP3P42574 277 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 NAMPTP43490 491 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GRM3Q14832 879 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PGM5Q15124 567 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 DPYSL2Q16555 572 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GEN1Q17RS7 908 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 OR6B2Q6IFH4 312 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 TBPL2Q6SJ96 375 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CATSPER4Q7RTX7 472 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 THAP5Q7Z6K1 395 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 FUNDC1Q8IVP5 155 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 MINDY1Q8N5J2 469 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 PHF10Q8WUB8 498 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 HTRA1Q92743 480 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 EMILIN2Q9BXX0 1053 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 OSBPL2Q9H1P3 480 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 CHRAC1Q9NRG0 131 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 QPCTLQ9NXS2 382 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GGA3Q9NZ52 723 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GOLGA8CPA6NN73 597 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 M0R3G1 203 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 IDH3BO43837 385 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 KCNK2O95069 426 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GSNP06396 782 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 EIF2DP41214 584 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 ATP4BP51164 291 aa8.05□□□□□ -1.12
HMGXB4-202ENST00000418170 GP2P55259 537 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms