RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 HACD3Q9P035 362 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 DLGAP2Q9P1A6 1054 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 MTRF1LQ9UGC7 380 aaKnown RBP8.51□□□□□ -1.05
TRIM48-201ENST00000417545 FBXO4Q9UKT5 387 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 SHOC2Q9UQ13 582 aa8.51□□□□□ -1.05
TRIM48-201ENST00000417545 A0A0J9YYE9 177 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 C1orf232A0A0U1RR37 186 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 TSPAN11A1L157 253 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 C2orf81A6NN90 581 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 ANKRD66B4E2M5 251 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 TRAFD1O14545 582 aaPredicted RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 TSPAN6O43657 245 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 GPR37L1O60883 481 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 SEMA4FO95754 770 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 EPOP01588 193 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 TRBC1P01850 177 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PDHA1P08559 390 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 ALPIP09923 528 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PIRTP0C851 137 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PYGBP11216 843 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 CHRM1P11229 460 aaPredicted RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 CD6P30203 668 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 DRD3P35462 400 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 CHRNA4P43681 627 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 RPL21P46778 160 aaKnown RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 METAP1P53582 386 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 ARL4CP56559 192 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PDE1BQ01064 536 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 RPL6Q02878 288 aaKnown RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 SGCGQ13326 291 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 KCNJ11Q14654 390 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 POU6F1Q14863 301 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 ACOX1Q15067 660 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 ANGPT1Q15389 498 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 QPCTQ16769 361 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 RNASEH2BQ5TBB1 312 aaKnown RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 CEP128Q6ZU80 1094 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 C11orf74Q86VG3 221 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 WDR5BQ86VZ2 330 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 LONP2Q86WA8 852 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 RASSF3Q86WH2 238 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 CCDC25Q86WR0 208 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PDIK1LQ8N165 341 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 OR2T34Q8NGX1 318 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 RLN3Q8WXF3 142 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 CPT1BQ92523 772 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 ECHDC3Q96DC8 303 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 HINFPQ9BQA5 517 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 FAM126AQ9BYI3 521 aaPredicted RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 NEUROG2Q9H2A3 272 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PREBQ9HCU5 417 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 ITM2CQ9NQX7 267 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PRMT8Q9NR22 394 aaPredicted RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PIH1D1Q9NWS0 290 aaKnown RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PKD2L2Q9NZM6 624 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 WHRNQ9P202 907 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 B4GALT6Q9UBX8 382 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 EBF1Q9UH73 591 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 INVSQ9Y283 1065 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 ITM2BQ9Y287 266 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 FNDC3AQ9Y2H6 1198 aaKnown RBP8.5□□□□□ -1.05
TRIM48-201ENST00000417545 PKP3Q9Y446 797 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 MAD1L1Q9Y6D9 718 aa8.5□□□□□ -1.05
TRIM48-201ENST00000417545 LOC285095A0A1B0GVY8 99 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ESYT3A0FGR9 886 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 K7ESF4 209 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 STX7O15400 261 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 PLRG1O43660 514 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 AP1G1O43747 822 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 RNGTTO60942 597 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 RPP40O75818 363 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 SUN1O94901 812 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 SEC31AO94979 1220 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 FSBPO95073 299 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 TIMP2P16035 220 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ZNF30P17039 623 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 TPH1P17752 444 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 MCM3P25205 808 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 HNF1BP35680 557 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 MMP12P39900 470 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 NPY2RP49146 381 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ADPRHP54922 357 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 PLTPP55058 493 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 RPS21P63220 83 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 SEMG2Q02383 582 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 OLIG2Q13516 323 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 CUL1Q13616 776 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ELF2Q15723 593 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 HIF1AQ16665 826 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 PIP5KL1Q5T9C9 394 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 AGBL4Q5VU57 503 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ANKRD22Q5VYY1 191 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 DUPD1Q68J44 220 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 KIAA1161Q6NSJ0 714 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ZC3H14Q6PJT7 736 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 CENPUQ71F23 418 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 DPPA4Q7L190 304 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ZSWIM9Q86XI8 627 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 OTUD6BQ8N6M0 293 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms