RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CHFRQ96EP1 664 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 ADGRE3Q9BY15 652 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 INTS9Q9NV88 658 aaKnown RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 THG1LQ9NWX6 298 aaKnown RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 LMCD1Q9NZU5 365 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 SENP1Q9P0U3 644 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 FAM47DPA6NHR8 397 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 H3BQ06 376 aaPredicted RBP17.05■□□□□ 0.32
CALD1-204ENST00000417172 TPP1O14773 563 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 PRSS56P0CW18 603 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 PAMP19021 973 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 CA4P22748 312 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 LSP1P33241 339 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 SERPINB9P50453 376 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 ZNF140P52738 457 aaPredicted RBP17.05■□□□□ 0.32
CALD1-204ENST00000417172 EPHB1P54762 984 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 SNRPD1P62314 119 aaKnown RBP17.05■□□□□ 0.32
CALD1-204ENST00000417172 SULT2A1Q06520 285 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 MYLK3Q32MK0 819 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 ZNF789Q5FWF6 425 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 KIAA1958Q8N8K9 716 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 BANPQ8N9N5 519 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 OR6P1Q8NGX9 317 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 GRIN3AQ8TCU5 1115 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 FRS2Q8WU20 508 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 ISG20Q96AZ6 181 aaKnown RBP17.05■□□□□ 0.32
CALD1-204ENST00000417172 RIPOR3Q96MK2 946 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 MCMBPQ9BTE3 642 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 CAB39LQ9H9S4 337 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 ZDHHC4Q9NPG8 344 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 PCMTD2Q9NV79 361 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 MARCH4Q9P2E8 410 aaPredicted RBP17.05■□□□□ 0.32
CALD1-204ENST00000417172 SLC17A7Q9P2U7 560 aa17.05■□□□□ 0.32
CALD1-204ENST00000417172 MTO1Q9Y2Z2 717 aaKnown RBP17.05■□□□□ 0.32
CALD1-204ENST00000417172 ATG2BQ96BY7 2078 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 A8MX80 341 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 HTRA2O43464 458 aaPredicted RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 PAPSS2O95340 614 aaPredicted RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 AHSGP02765 367 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 CSNK1DP48730 415 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 WDR4P57081 412 aaKnown RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 THOC5Q13769 683 aaKnown RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 PDGFRLQ15198 375 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 CARD16Q5EG05 197 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 RALGPS1Q5JS13 557 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 LRRC73Q5JTD7 316 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 FSTL4Q6MZW2 842 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 NEPROQ6NW34 567 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 CDHR3Q6ZTQ4 885 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 CMC1Q7Z7K0 106 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 METTL3Q86U44 580 aaKnown RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 CNTN4Q8IWV2 1026 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 DCLK2Q8N568 766 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 PAF1Q8N7H5 531 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 SMRP1Q8NCR6 262 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 OR4K2Q8NGD2 314 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 OR2A12Q8NGT7 310 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 PTPRN2Q92932 1015 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 ATP13A3Q9H7F0 1226 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 BPIFA1Q9NP55 256 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 POLR3BQ9NW08 1133 aaPredicted RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 PRDM4Q9UKN5 801 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 GRID1Q9ULK0 1009 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 CCDC162PA2VCL2 907 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 PRPF4O43172 522 aaKnown RBP eCLIP17.04■□□□□ 0.323e-7■■■■□ 23.9
CALD1-204ENST00000417172 UGT2B4P06133 528 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 PSMC3P17980 439 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 GDI1P31150 447 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 LIMK2P53671 638 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 SEC24CP53992 1094 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 PRAMEP78395 509 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 RUNX3Q13761 415 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 GRTP1Q5TC63 336 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 LGSNQ5TDP6 509 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 YAF2Q8IY57 180 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 TCP10LQ8TDR4 215 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 EID2BQ96D98 161 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 ERLEC1Q96DZ1 483 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 LRCH3Q96II8 777 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 VPS39Q96JC1 886 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 SLC13A1Q9BZW2 595 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 CEP44Q9C0F1 390 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 FBXO6Q9NRD1 293 aaPredicted RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 DEC1Q9P2X7 70 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 FNDC3AQ9Y2H6 1198 aaKnown RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 SLC27A6Q9Y2P4 619 aa17.04■□□□□ 0.32
CALD1-204ENST00000417172 USP15Q9Y4E8 981 aaPredicted RBP17.04■□□□□ 0.32
CALD1-204ENST00000417172 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.03■□□□□ 0.32
CALD1-204ENST00000417172 GSRP00390 522 aa17.03■□□□□ 0.32
CALD1-204ENST00000417172 GOT2P00505 430 aaKnown RBP17.03■□□□□ 0.32
CALD1-204ENST00000417172 DLDP09622 509 aaKnown RBP17.03■□□□□ 0.32
CALD1-204ENST00000417172 GJA4P35212 333 aa17.03■□□□□ 0.32
CALD1-204ENST00000417172 OPRD1P41143 372 aa17.03■□□□□ 0.32
CALD1-204ENST00000417172 ACVR1Q04771 509 aa17.03■□□□□ 0.32
CALD1-204ENST00000417172 SLC18A2Q05940 514 aa17.03■□□□□ 0.32
CALD1-204ENST00000417172 GRM3Q14832 879 aa17.03■□□□□ 0.32
CALD1-204ENST00000417172 TAF1AQ15573 450 aaPredicted RBP17.03■□□□□ 0.32
CALD1-204ENST00000417172 PPM1JQ5JR12 505 aa17.03■□□□□ 0.32
CALD1-204ENST00000417172 GRAMD4Q6IC98 578 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms