RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 DDX50Q9BQ39 737 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-206ENST00000416651 TNMDQ9H2S6 317 aa8.74□□□□□ -1.01
NIF3L1-206ENST00000416651 SLC39A1Q9NY26 324 aa8.74□□□□□ -1.01
NIF3L1-206ENST00000416651 ITGB1BP2Q9UKP3 347 aa8.74□□□□□ -1.01
NIF3L1-206ENST00000416651 HS3ST2Q9Y278 367 aa8.74□□□□□ -1.01
NIF3L1-206ENST00000416651 PCDHGA3Q9Y5H0 932 aa8.74□□□□□ -1.01
NIF3L1-206ENST00000416651 ANKRD36A6QL64 1941 aa8.74□□□□□ -1.01
NIF3L1-206ENST00000416651 TCAF2A6NFQ2 919 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 C16orf96A6NNT2 1141 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 KCNU1A8MYU2 1149 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 IKBKBO14920 756 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 SORBS2O94875 1100 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 DDAH2O95865 285 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 TRUB2O95900 331 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 CD160O95971 181 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 IGLV3-25P01717 112 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 PRNPP04156 253 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 CTSEP14091 401 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 GLB1P16278 677 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 PDCP20941 246 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 BRD2P25440 801 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 CD1CP29017 333 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 ALDH4A1P30038 563 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 DNA2P51530 1060 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 NUCB2P80303 420 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 CHAF1BQ13112 559 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 EIF4EBP2Q13542 120 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 AUHQ13825 339 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 ERV3-1Q14264 604 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 KLHL40Q2TBA0 621 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 TMEM164Q5U3C3 297 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 FAM186BQ8IYM0 893 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 BMPERQ8N8U9 685 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 Q8NA96 180 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 FAM46DQ8NEK8 389 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 GPBAR1Q8TDU6 330 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 OR1E3Q8WZA6 343 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 KAT5Q92993 513 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 RTP4Q96DX8 246 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 TMX3Q96JJ7 454 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 RPRD1AQ96P16 312 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 RANBP9Q96S59 729 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 TSPAN10Q9H1Z9 355 aaPredicted RBP8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 ZDHHC6Q9H6R6 413 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 SPATS2LQ9NUQ6 558 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 OR1A2Q9Y585 309 aa8.73□□□□□ -1.01
NIF3L1-206ENST00000416651 TMEM202A6NGA9 273 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 AP1G1O43747 822 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 TRIM21P19474 475 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 TCN2P20062 427 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 RECQLP46063 649 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 CCNHP51946 323 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 SRP54P61011 504 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 LRMPQ12912 555 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 ELOCQ15369 112 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 INPP5JQ15735 1006 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 WSCD2Q2TBF2 565 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 C14orf28Q4W4Y0 310 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 CPZQ66K79 652 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 CNNM4Q6P4Q7 775 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 LEKR1Q6ZMV7 388 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 PIM3Q86V86 326 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 ZNF761Q86XN6 746 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 TP53INP2Q8IXH6 220 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 NRSN1Q8IZ57 195 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 PELI3Q8N2H9 469 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 FSTL5Q8N475 847 aaPredicted RBP8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 PLA2G15Q8NCC3 412 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 IRGQQ8WZA9 623 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 TMEM159Q96B96 161 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 FAM149B1Q96BN6 582 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 BTN2A3PQ96KV6 586 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 TBATAQ96M53 351 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 SERPINB11Q96P15 392 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 SLC30A3Q99726 388 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 WRAP53Q9BUR4 548 aaKnown RBP8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 IMPG2Q9BZV3 1241 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 TM6SF2Q9BZW4 377 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 TMEM168Q9H0V1 697 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 MUC3BQ9H195 1237 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 RRN3Q9NYV6 651 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 HESX1Q9UBX0 185 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 ST14Q9Y5Y6 855 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 HS3ST4Q9Y661 456 aa8.72□□□□□ -1.01
NIF3L1-206ENST00000416651 SVILO95425 2214 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 A8MU76 341 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 M0QYV0 167 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 NEMP1O14524 444 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 EIF5BO60841 1220 aaKnown RBP8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 ZMPSTE24O75844 475 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 CPNE6O95741 557 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 APOEP02649 317 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 ALPIP09923 528 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 H2AFB1P0C5Y9 115 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 H2AFB2P0C5Z0 115 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 VDRP11473 427 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 PDIA4P13667 645 aaKnown RBP8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 ZNF28P17035 718 aa8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 HNRNPH3P31942 346 aaKnown RBP8.71□□□□□ -1.02
NIF3L1-206ENST00000416651 LIMK2P53671 638 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms