RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 LAMP2P13473 410 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 CAPN2P17655 700 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 ARL3P36405 182 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 PSMC4P43686 418 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 RARSP54136 660 aaKnown RBP6.97□□□□□ -1.29
LINC00343-202ENST00000415294 RPL7AP62424 266 aaKnown RBP6.97□□□□□ -1.29
LINC00343-202ENST00000415294 EFNB1P98172 346 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 FOXD4Q12950 439 aaPredicted RBP6.97□□□□□ -1.29
LINC00343-202ENST00000415294 MAMLD1Q13495 774 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 TDGQ13569 410 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 ZNF362Q5T0B9 420 aaPredicted RBP6.97□□□□□ -1.29
LINC00343-202ENST00000415294 TMEM268Q5VZI3 342 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 NAPEPLDQ6IQ20 393 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 ZNF790Q6PG37 636 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 C17orf99Q6UX52 265 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 LRIG3Q6UXM1 1119 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 GHDCQ8N2G8 530 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 AGBL3Q8NEM8 1001 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 HDAC7Q8WUI4 952 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 ZDHHC7Q9NXF8 308 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 GRHL1Q9NZI5 618 aa6.97□□□□□ -1.29
LINC00343-202ENST00000415294 LRRC37AA6NMS7 1700 aa6.96□□□□□ -1.29
LINC00343-202ENST00000415294 DDX60LQ5H9U9 1706 aaKnown RBP6.96□□□□□ -1.29
LINC00343-202ENST00000415294 NUP98P52948 1817 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 PSME4Q14997 1843 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.96□□□□□ -1.3
LINC00343-202ENST00000415294 TTC36A6NLP5 189 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 SEC14L2O76054 403 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 SERPINC1P01008 464 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 ST6GAL1P15907 406 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 HOXD10P28358 340 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 HOXA7P31268 230 aaPredicted RBP6.96□□□□□ -1.3
LINC00343-202ENST00000415294 CYP2J2P51589 502 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 ELLP55199 621 aaPredicted RBP6.96□□□□□ -1.3
LINC00343-202ENST00000415294 GALNT3Q14435 633 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 TBCEQ15813 527 aaPredicted RBP6.96□□□□□ -1.3
LINC00343-202ENST00000415294 RPE65Q16518 533 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 SLC45A4Q5BKX6 768 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 TMEM81Q6P7N7 255 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 PCSK4Q6UW60 755 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 RPAP2Q8IXW5 612 aaPredicted RBP6.96□□□□□ -1.3
LINC00343-202ENST00000415294 KLHL29Q96CT2 875 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 USP16Q9Y5T5 823 aa6.96□□□□□ -1.3
LINC00343-202ENST00000415294 CFAP54Q96N23 3096 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 COL3A1P02461 1466 aaPredicted RBP6.95□□□□□ -1.3
LINC00343-202ENST00000415294 A0A1W2PQM1 296 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 PRSS47A8MTI9 375 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 CEP104O60308 925 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 TIPRLO75663 272 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 CENPBP07199 599 aaPredicted RBP6.95□□□□□ -1.3
LINC00343-202ENST00000415294 ACVRL1P37023 503 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 GDF5P43026 501 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 HARS2P49590 506 aaKnown RBP6.95□□□□□ -1.3
LINC00343-202ENST00000415294 DRG2P55039 364 aaKnown RBP6.95□□□□□ -1.3
LINC00343-202ENST00000415294 PRKCZQ05513 592 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 ZBTB16Q05516 673 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 ARL13AQ5H913 290 aaPredicted RBP6.95□□□□□ -1.3
LINC00343-202ENST00000415294 KIAA1755Q5JYT7 1200 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 SUSD4Q5VX71 490 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 IL20RBQ6UXL0 311 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 IGFN1Q86VF2 1251 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 C8orf58Q8NAV2 365 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 SEMA6DQ8NFY4 1073 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 OSR1Q8TAX0 266 aaPredicted RBP6.95□□□□□ -1.3
LINC00343-202ENST00000415294 NELL1Q92832 810 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 MUC13Q9H3R2 512 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 ATP8A2Q9NTI2 1148 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 PEMTQ9UBM1 199 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 POLLQ9UGP5 575 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 RABGAP1Q9Y3P9 1069 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 LAMB2P55268 1798 aa6.95□□□□□ -1.3
LINC00343-202ENST00000415294 UBN2Q6ZU65 1347 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 MYO9BQ13459 2157 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 ZFHX4Q86UP3 3567 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 IBTKQ9P2D0 1353 aaPredicted RBP6.94□□□□□ -1.3
LINC00343-202ENST00000415294 USP34Q70CQ2 3546 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 OTOFQ9HC10 1997 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 CCL15-CCL14A0A0B4J2E2 113 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 TEX13CA0A0J9YWL9 993 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 TCRBV7S3A2A0A539 114 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 ARHGAP10A1A4S6 786 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 NPIPB15A6NHN6 443 aaPredicted RBP6.94□□□□□ -1.3
LINC00343-202ENST00000415294 CYR61O00622 381 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 NFATC1O95644 943 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 DDAH2O95865 285 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 GPTP24298 496 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 CLK3P49761 638 aaKnown RBP6.94□□□□□ -1.3
LINC00343-202ENST00000415294 NEXNQ0ZGT2 675 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 FHL2Q14192 279 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 SHHQ15465 462 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 CCL15Q16663 113 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 SNX30Q5VWJ9 437 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 ISM2Q6H9L7 571 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 KLHL24Q6TFL4 600 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 CYB5R4Q7L1T6 521 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 PRSS45Q7RTY3 260 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 PXKQ7Z7A4 578 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 DNAAF1Q8NEP3 725 aa6.94□□□□□ -1.3
LINC00343-202ENST00000415294 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.94□□□□□ -1.3
LINC00343-202ENST00000415294 NEK9Q8TD19 979 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms