RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 RSRC1Q96IZ7 334 aaKnown RBP13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 ZNF778Q96MU6 729 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 ADGRE3Q9BY15 652 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 PPP1R12CQ9BZL4 782 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 C20orf27Q9GZN8 174 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 ATXN3LQ9H3M9 355 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 CWH43Q9H720 699 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 CD320Q9NPF0 282 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 PNPOQ9NVS9 261 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 NDE1Q9NXR1 346 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 TAS2R1Q9NYW7 299 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 VWA7Q9Y334 891 aa13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 ZNF638Q14966 1978 aaKnown RBP13.56□□□□□ -0.24
SSR4P1-201ENST00000415143 SHROOM3Q8TF72 1996 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 CCDC189A1A4V9 331 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 C2orf81A6NN90 581 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 PHGDHO43175 533 aaKnown RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 EFEMP2O95967 443 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 URODP06132 367 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 MMP2P08253 660 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 NCF2P19878 526 aaPredicted RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 GABRB3P28472 473 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 COPAP53621 1224 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 CCL23P55773 120 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 MAXP61244 160 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 DLG2Q15700 870 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 CCDC6Q16204 474 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 TRMT5Q32P41 509 aaKnown RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 CES4AQ5XG92 561 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 RINLQ6ZS11 566 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 NET1Q7Z628 596 aaPredicted RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 RAB44Q7Z6P3 723 aaPredicted RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 CILP2Q8IUL8 1156 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 SCUBE1Q8IWY4 988 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 RNF168Q8IYW5 571 aaPredicted RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 ENDOVQ8N8Q3 282 aaKnown RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 SCLYQ96I15 445 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 PSKH2Q96QS6 385 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 TCF12Q99081 682 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 OMDQ99983 421 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 TRMOQ9BU70 441 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 SPON2Q9BUD6 331 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 ZNF395Q9H8N7 513 aaPredicted RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 EBF2Q9HAK2 575 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 PDFQ9HBH1 243 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 CYP4F11Q9HBI6 524 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 INTS10Q9NVR2 710 aaKnown RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 ZNF358Q9NW07 568 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 SPG21Q9NZD8 308 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 ARMCX1Q9P291 453 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 CPSF2Q9P2I0 782 aaKnown RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 STOML1Q9UBI4 398 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 SLC2A6Q9UGQ3 507 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 ZNF510Q9Y2H8 683 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 ASB3Q9Y575 518 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 ZFP37Q9Y6Q3 630 aaPredicted RBP13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 ZDBF2Q9HCK1 2354 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 TRANK1O15050 2925 aa13.55□□□□□ -0.24
SSR4P1-201ENST00000415143 C2orf71A6NGG8 1288 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 GOLGA8CPA6NN73 597 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 RFXAPO00287 272 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 PRRG1O14668 218 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 INSIG1O15503 277 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 COCHO43405 550 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 SMIM24O75264 130 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 UPP2O95045 317 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 ATXN1LP0C7T5 689 aaKnown RBP13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 THRAP10827 490 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 ARNTP27540 789 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 PMLP29590 882 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 CORO1AP31146 461 aaKnown RBP13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 PPM1AP35813 382 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 ACVRL1P37023 503 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 AVPR1AP37288 418 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 CHRNA4P43681 627 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 ABCG1P45844 678 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 CCNG1P51959 295 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 TAS2R39P59534 338 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 RAB33AQ14088 237 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 HECTD2Q5U5R9 776 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 DEFB128Q7Z7B8 93 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 DENND1CQ8IV53 801 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 TMEM199Q8N511 208 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 HDAC10Q969S8 669 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 NXNL1Q96CM4 212 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 EBF4Q9BQW3 602 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 CCDC68Q9H2F9 335 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 COG4Q9H9E3 785 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 SYTL2Q9HCH5 934 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 TCF7L2Q9NQB0 619 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 HACD3Q9P035 362 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 XPR1Q9UBH6 696 aa13.54□□□□□ -0.24
SSR4P1-201ENST00000415143 BCAP29Q9UHQ4 241 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms