RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 MTA2O94776 668 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 TSPAN19P0C672 248 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 MYL12AP19105 171 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 KLRC2P26717 231 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 TUBA1BP68363 451 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 CREMQ03060 361 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 BTG3Q14201 252 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 TYSND1Q2T9J0 566 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 EEF1DP3Q658K8 133 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 LLGL2Q6P1M3 1020 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 MZT2AQ6P582 158 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 TUBA3EQ6PEY2 450 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 TUBA1AQ71U36 451 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 KBTBD8Q8NFY9 601 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 ANKRD49Q8WVL7 239 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 NKD2Q969F2 451 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 TRMOQ9BU70 441 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 SPEF1Q9Y4P9 236 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 BBIP1A8MTZ0 92 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 H7C0S8 307 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 QSOX1O00391 747 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 SHOX2O60902 331 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 FGF1P05230 155 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 FESP07332 822 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 HADHBP55084 474 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 SNRPD1P62314 119 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 GPRIN3Q6ZVF9 776 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 KRT77Q7Z794 578 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 ADAMTSL2Q86TH1 951 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 MAGEE2Q8TD90 523 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 ZHX1-C8orf76Q96EF9 292 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 MARK4Q96L34 752 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 CCDC3Q9BQI4 270 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 OSBPL11Q9BXB4 747 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 SF3B1O75533 1304 aaKnown RBP eCLIP13.79□□□□□ -0.24e-6■■■■■ 156
SMARCA4-202ENST00000413806 SGTAO43765 313 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 POLR2EP19388 210 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 RPL3P39023 403 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 DDI2Q5TDH0 399 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 FAM35AQ86V20 835 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 ALYREFQ86V81 257 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 HTRA1Q92743 480 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 BBS4Q96RK4 519 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 NFKBIZQ9BYH8 718 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 XPR1Q9UBH6 696 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 BCLAF3A2AJT9 711 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 TRMUO75648 421 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 IDO1P14902 403 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 SGCGQ13326 291 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 SETMARQ53H47 684 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 FGD3Q5JSP0 725 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 C9orf57Q5W0N0 161 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 PPTC7Q8NI37 304 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 CENPIQ92674 756 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 SLCO1B3Q9NPD5 702 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 KLHL1Q9NR64 748 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 PLLPQ9Y342 182 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 OTCP00480 354 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 COL6A2P12110 1019 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 PPM1LQ5SGD2 360 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 DCLRE1AQ6PJP8 1040 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 BPIFB6Q8NFQ5 453 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 RHOJQ9H4E5 214 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 ASB8Q9H765 288 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 LGALS13Q9UHV8 139 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 NUDT5Q9UKK9 219 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 PMF1-BGLAPU3KQ54 211 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 RICTORQ6R327 1708 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 A8MUI8 341 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 STARP49675 285 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 CLYBLQ8N0X4 340 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 SFRP1Q8N474 314 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 P2RY11Q96G91 374 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 TBCDQ9BTW9 1192 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 MOV10Q9HCE1 1003 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 FBXO5Q9UKT4 447 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 COG5Q9UP83 839 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 HES2Q9Y543 173 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 PCDHAC2Q9Y5I4 1007 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 AZIN1O14977 448 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 CILPO75339 1184 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 STAT5AP42229 794 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 IRF8Q02556 426 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 PSMD5Q16401 504 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 FBXO30Q8TB52 745 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 USP7Q93009 1102 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 PPP1R16AQ96I34 528 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 SEMA3CQ99985 751 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 FTHL17Q9BXU8 183 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 SLC17A7Q9P2U7 560 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 BAIAP2Q9UQB8 552 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 TDRKHQ9Y2W6 561 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 H3BN98 237 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 ACADMP11310 421 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 FECHP22830 423 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 QPCTQ16769 361 aa13.78□□□□□ -0.2
SMARCA4-202ENST00000413806 CCDC157Q569K6 752 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms