RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 RD3Q7Z3Z2 195 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 PHLDB2Q86SQ0 1253 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 VASH2Q86V25 355 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 C17orf82Q86X59 251 aaPredicted RBP12.24□□□□□ -0.45
LIMS2-210ENST00000413578 ZFAND4Q86XD8 727 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 DNAAF5Q86Y56 855 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 FAM114A1Q8IWE2 563 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 OR56A4Q8NGH8 313 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 SLC30A5Q8TAD4 765 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 EXOC2Q96KP1 924 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 ZNF641Q96N77 438 aaPredicted RBP12.24□□□□□ -0.45
LIMS2-210ENST00000413578 PCDHB18PQ96TA0 734 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 FUCA2Q9BTY2 467 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 ATP8A1Q9Y2Q0 1164 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 DAAM1Q9Y4D1 1078 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 RNF215Q9Y6U7 377 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 RELNP78509 3460 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 LRP4O75096 1905 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 FLNCQ14315 2725 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 TNFRSF10CO14798 259 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 NUDT21O43809 227 aaKnown RBP12.23□□□□□ -0.45
LIMS2-210ENST00000413578 KRT3P12035 628 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 XPAP23025 273 aaPredicted RBP12.23□□□□□ -0.45
LIMS2-210ENST00000413578 RGRP47804 291 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 ARSDP51689 593 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 JAM2P57087 298 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 NR1D2Q14995 579 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 C16orf72Q14CZ0 275 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 C14orf28Q4W4Y0 310 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 ERAP2Q6P179 960 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 ATG14Q6ZNE5 492 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 ZNF438Q7Z4V0 828 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 SLFN11Q7Z7L1 901 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 CAMK1DQ8IU85 385 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 PELI3Q8N2H9 469 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 Q8N9G6 341 aaPredicted RBP12.23□□□□□ -0.45
LIMS2-210ENST00000413578 ATL2Q8NHH9 583 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 CCL4L1Q8NHW4 92 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 USP7Q93009 1102 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 ECHDC3Q96DC8 303 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 TUBGCP5Q96RT8 1024 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 CMKLR1Q99788 373 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 SEMA6CQ9H3T2 930 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 LRRC19Q9H756 370 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 MRPL40Q9NQ50 206 aaKnown RBP12.23□□□□□ -0.45
LIMS2-210ENST00000413578 SEPT10Q9P0V9 454 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 LRIT1Q9P2V4 623 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 SCN8AQ9UQD0 1980 aa12.23□□□□□ -0.45
LIMS2-210ENST00000413578 LRRK2Q5S007 2527 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 SPENQ96T58 3664 aaKnown RBP12.22□□□□□ -0.45
LIMS2-210ENST00000413578 B4GAT1O43505 415 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 PRAMEF11O60813 436 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 RECQL5O94762 991 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-210ENST00000413578 GFPT2O94808 682 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 PRKCGP05129 697 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 SFTPCP11686 197 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 GPD1P21695 349 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-210ENST00000413578 CSNK1DP48730 415 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 CLCA4Q14CN2 919 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-210ENST00000413578 DPCR1Q3MIW9 517 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 HSP90AA4PQ58FG1 418 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 EFHC2Q5JST6 749 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 MANEAQ5SRI9 462 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 SPECC1LQ69YQ0 1117 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 TRIM72Q6ZMU5 477 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 TAF8Q7Z7C8 310 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 ZNF354CQ86Y25 554 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 NRROSQ86YC3 692 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 C3orf20Q8ND61 904 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 FAM46DQ8NEK8 389 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 SPOCK2Q92563 424 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 NSMCE3Q96MG7 304 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 NCAPGQ9BPX3 1015 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 ARHGAP9Q9BRR9 750 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 LGR4Q9BXB1 951 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 TMEM168Q9H0V1 697 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 SAMSN1Q9NSI8 373 aaKnown RBP12.22□□□□□ -0.45
LIMS2-210ENST00000413578 GEMIN8Q9NWZ8 242 aaKnown RBP12.22□□□□□ -0.45
LIMS2-210ENST00000413578 UBA2Q9UBT2 640 aaPredicted RBP12.22□□□□□ -0.45
LIMS2-210ENST00000413578 FZD10Q9ULW2 581 aa12.22□□□□□ -0.45
LIMS2-210ENST00000413578 SIGLEC16A6NMB1 481 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 J3KR12 359 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 CACNB4O00305 520 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-210ENST00000413578 TRAFD1O14545 582 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-210ENST00000413578 EPHB6O15197 1021 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 CCP110O43303 1012 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 CCL4P13236 92 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 SOX5P35711 763 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 ZNF143P52747 638 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-210ENST00000413578 UBE2HP62256 183 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 CYP4F2P78329 520 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 BECN1Q14457 450 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 CLPPQ16740 277 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-210ENST00000413578 LIPIQ6XZB0 460 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 ZNF574Q6ZN55 896 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-210ENST00000413578 DPPA4Q7L190 304 aa12.21□□□□□ -0.45
LIMS2-210ENST00000413578 MON1BQ7L1V2 547 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms