RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZAP70P43403 619 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 HTR3AP46098 478 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 RPL21P46778 160 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 HNRNPKP61978 463 aaKnown RBP eCLIP5.26□□□□□ -1.57
HERC4-205ENST00000412272 TXNL4AP83876 142 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 PTPN12Q05209 780 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZNF267Q14586 743 aaPredicted RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 ANKRD40Q6AI12 368 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CNSTQ6PJW8 725 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 PRR23BQ6ZRT6 265 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ANKS3Q6ZW76 656 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 FAM178BQ8IXR5 827 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CNTD1Q8N815 330 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 PYDC1Q8WXC3 89 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CELF1Q92879 486 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 EDC3Q96F86 508 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 BBS4Q96RK4 519 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 TRIM51Q9BSJ1 452 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 JMJD4Q9H9V9 463 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 SMOXQ9NWM0 555 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 SRRDQ9UH36 339 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 INPP5FQ9Y2H2 1132 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 RNF11Q9Y3C5 154 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 C2orf71A6NGG8 1288 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 TTLL8A6PVC2 850 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 H3BNH8 94 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 GPR37O15354 613 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 TYROBPO43914 113 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 GPX5O75715 221 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 NDST3O95803 873 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CDK1P06493 297 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 GDI1P31150 447 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CNTN2Q02246 1040 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 HSF2Q03933 536 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ZBTB37Q5TC79 503 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 DCAF12L1Q5VU92 463 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 RRAGAQ7L523 313 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 PLEKHH3Q7Z736 793 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 NEK8Q86SG6 692 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 TRABD2AQ86V40 505 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 COMTD1Q86VU5 262 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CHSY1Q86X52 802 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 PHC2Q8IXK0 858 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ULK2Q8IYT8 1036 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 DEPDC1BQ8WUY9 529 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ST8SIA4Q92187 359 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 MCRS1Q96EZ8 462 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CCDC17Q96LX7 622 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CELF4Q9BZC1 486 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 GPR61Q9BZJ8 451 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ELAC1Q9H777 363 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 PCDHB16Q9NRJ7 776 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 CNNM1Q9NRU3 951 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 FAM207AQ9NSI2 230 aaPredicted RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 BLOC1S4Q9NUP1 217 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 DNAJC17Q9NVM6 304 aaKnown RBP5.26□□□□□ -1.57
HERC4-205ENST00000412272 CMTM6Q9NX76 183 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 GRHPRQ9UBQ7 328 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 ADAMTS1Q9UHI8 967 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGB1Q9Y5G3 927 aa5.26□□□□□ -1.57
HERC4-205ENST00000412272 PTPRFP10586 1907 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PITPNM1O00562 1244 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 FAM189A1O60320 539 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PLOD3O60568 738 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PLGP00747 810 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 GNSP15586 552 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 FBLN1P23142 703 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CRHR1P34998 444 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 GNG10P50151 68 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 RAB13P51153 203 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 MAPK12P53778 367 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SP2Q02086 613 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 BNIP2Q12982 314 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CLN3Q13286 438 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 BMPR2Q13873 1038 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 TRIP10Q15642 601 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PLEKHG4Q58EX7 1191 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 FAM47CQ5HY64 1035 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 MANEALQ5VSG8 457 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ARHGEF16Q5VV41 709 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SCYL2Q6P3W7 929 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SYCE2Q6PIF2 218 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 LRFN4Q6PJG9 635 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ATG14Q6ZNE5 492 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 VN1R5Q7Z5H4 357 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 GPAT4Q86UL3 456 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CDH24Q86UP0 819 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ZC3H7AQ8IWR0 971 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 CHERPQ8IWX8 916 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 CYP4Z2PQ8N1L4 340 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ZCCHC7Q8N3Z6 543 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 PLD5Q8N7P1 536 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 IL17REQ8NFR9 667 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SLC7A14Q8TBB6 771 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SHKBP1Q8TBC3 707 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CABLES1Q8TDN4 633 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ST6GAL2Q96JF0 529 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 RBM4BQ9BQ04 359 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 COPS4Q9BT78 406 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 RBM4Q9BWF3 364 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms